Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6042 |
Symbol | |
ID | 6125017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 25710 |
End bp | 26744 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647061 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001773658 |
Protein GI | 170734544 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.220218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.564573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAT CCGACGATGA CGGCACGCGA CTGTTCGGCC GTTCGCGAAC AATTCAGGAT CTGCTGCTGA AAGTGTCGCG CGTCGCCGCC ACCCGCGTGA GTGTGCTGGT GGTCGGCGAA AGCGGTGCGG GAAAAGATAT CGTCGCCCGG CTCATTCACG ACATGAGCCC GCGCCGGCGC GGCCCGTTCG TGCCCGTCAA CTGCGGCGCG ATTCCGAAAG ACATCGCGGA GTCGCAGCTG TTCGGCCACG AAAAAGGCAG CTTCACGGGC GCCGTTGCAC AACATGTGGG CATGTTCGAG GCCGCACGCG GCGGCACGCT GTTCCTCGAC GAGATCGCCG AGATGCCGCT CGAATTGCAG GTCAAGCTGC TGCGCACGCT CGAAACCAAC ACGATCGTTC GCGTGGGCGG CCACGAGGCG ATTCCGCTCG ACGTGCGGAT CGTCGCGGCC ACGCATCACG ATCCGGTCGA GGCATTGCGC AGCGGCGCGT TGCGCGAAGA CCTGTTCTAC CGGATCGCAC CGATCGCGCT GCACGTGCCC GCGCTGCGGC AGCGCGAGGA CGACGTCGGC GACATCGCGG TGCAGATCGT CGAACGGCTG AACGCGCGGC ACCGCACCAG GAAGCGGCTG TCGACGCAGG CGATGAAGGC GCTGCGCGCG TACACGTGGC CCGGCAACGT GCGCGAACTG CGCAATACGC TGGAGCGCGC GTTCATCCTC GCCGACGAGC AGATCGAGCT GCAGTTGCCG CGCCGTCCGC CGCCGCGCGA GGAAGTGCGT CACAACGCAA TGACGCTGCA TATCGGCACG ACGCTCGCGC ACACGCAGCA GCGCTTCATC GTCGCGTCGC TGCGGCATTT CAACGGCGAC AAGCCGCGCA CCGCGAAGGC GCTCGGCATC AGCCTGAAAA CGCTGTACAA CCGCCTCGCG CTGCTGCCCG AAAGCGAGCG CAATGCAGTC ACTGGCAGCG CGCCGCCGAA TGCCGCGAAC GGCGGCGGCA ACGCACCCGC ATCGCCGCCC GCGACGACGC CGTGA
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Protein sequence | MSKSDDDGTR LFGRSRTIQD LLLKVSRVAA TRVSVLVVGE SGAGKDIVAR LIHDMSPRRR GPFVPVNCGA IPKDIAESQL FGHEKGSFTG AVAQHVGMFE AARGGTLFLD EIAEMPLELQ VKLLRTLETN TIVRVGGHEA IPLDVRIVAA THHDPVEALR SGALREDLFY RIAPIALHVP ALRQREDDVG DIAVQIVERL NARHRTRKRL STQAMKALRA YTWPGNVREL RNTLERAFIL ADEQIELQLP RRPPPREEVR HNAMTLHIGT TLAHTQQRFI VASLRHFNGD KPRTAKALGI SLKTLYNRLA LLPESERNAV TGSAPPNAAN GGGNAPASPP ATTP
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