Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5921 |
Symbol | |
ID | 6128725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 3118053 |
End bp | 3119588 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641653005 |
Product | type II/III secretion system family protein |
Protein accession | YP_001779532 |
Protein GI | 170738272 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0561262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGC ATCTCGCGTG CGGCGAACCC GAGCCGGCCG CGCCGGCACC CCGGCCCGCA CCGGCATCGG CCGTGTCCGC GCCGGCGGCG ACCGCGCCGC CGCATGCGCG CCGCACGACG CGCGGGCACT CCGCCGGCAA GGCGGCCAGC GACACGCGTG CTGTGGCGCC GCCGCCGCGA CGCAGGTCGC CCGACTGCCG CGCGCATGCG TGTGCGCTGC CCAACATGCC GCCGTGGTCG TCCGCGCCGT ACCGCTATTC CACCAGCGGC GCATCGCTGC CGGACACGCT GCGTGCGCTG TCCGCCGCGA CGCATGTGCC GATTGCGTTC GATGCGGGGC TGCCGGGCCG CGTCGAAGGG CGCTTCGAGC TGCCGCCGCA GCGCTTCGTC GAGATGCTCG CGCACGGGTA CGGGCTCGTC TGGTATTACG ACGGCACGGT GCTGCACGTC GATGCGGCCG GCACGCAGAC CACGCTGATC GTCCGGCTCA ACTACGCCCG CCCGACGGAC CTGCATGCAT TGCTCGCGCA GACCGGCATC GACGACGTGC GGTTCGTCGC GCGCGACGAT GCGCCGGCCC GCGGCCTCAT CACGTTTCGC GGGCCGCCGG CGTGGATCGC GCTCGTGGGC CGCGCGGCGC AGCGACTCGA CGCCGACGCG CGTGCGCGCG TGAAGACGGC GGTGCGCATC GTGCCGCTCC ACTATGGCAA CGCGGCGGAC CGCTCGGCGT TCGCGAACGG GCGAAGCAAC GTCGTGCAGG GCGTCGCCAG CCGAGCGGCG CGCGTGCTCG ATCCCCACGA CAGCCTGCGC GCGACCATCA CCGAATACGA GGCGCCGCTG CCGGTGCTCG GCGCCGATGC GGGCACGAAC GCGGTGCTGG TGCGCGACCG GCCCGAGCGG CTCGACGCCG ACGTGCGGGC GATCATCGCG CTCGACCGGC CCCGGCAGCA CGTCGGCCTC GGCCTGCTGG TGGCCGAAGT CGATACGGAT GCGCTGGGCG CGATCGGGCT CGGTGCACCG GGCGCCACGG TGATGCGCGC CCGCGCGGCG CGCAACCTGG GCGCCGCGCT ACGCGGCACG CCAGGGGTGC GCATGCTGAC CGACAGCGCG CTTCAGACGG ACGACGGCGT GGCCGTTGCA TGGGAACGGC ACGCCGAACA ACCGGTCGCG CCGACGGGCG GCCAGCGGGA CACGGCCGCA TCGGACGGCA CGGCCGCGGC CGCAGTGGCG GCCTCTGATC CGGGCCCGGC CACGGACGAC GCGTTGCGCA TCGTGCCGGC GCTCGACATG CGAACCGATC CGCCCCGTGT GGTGCTGGCC GTCGAATGGC GCGGTGCGAC GATCGACGTC GCGCGTGCGT CGATCGGGCC GGGCGAGATG CTCGCGATGG TGGAACCCGG TGCGTCCGCG CCGGCCGCCG GGCATGGGGC GATGCGGGTG ATTTTGCTCG CGCCGCATCC GGTCGACGGC TGTGCGTCGC TCGCCGATAC GGGTGAAAGG GCGCCGCCCG GTCAGCCGGC CGCGGCGTGC CGATGA
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Protein sequence | MLLHLACGEP EPAAPAPRPA PASAVSAPAA TAPPHARRTT RGHSAGKAAS DTRAVAPPPR RRSPDCRAHA CALPNMPPWS SAPYRYSTSG ASLPDTLRAL SAATHVPIAF DAGLPGRVEG RFELPPQRFV EMLAHGYGLV WYYDGTVLHV DAAGTQTTLI VRLNYARPTD LHALLAQTGI DDVRFVARDD APARGLITFR GPPAWIALVG RAAQRLDADA RARVKTAVRI VPLHYGNAAD RSAFANGRSN VVQGVASRAA RVLDPHDSLR ATITEYEAPL PVLGADAGTN AVLVRDRPER LDADVRAIIA LDRPRQHVGL GLLVAEVDTD ALGAIGLGAP GATVMRARAA RNLGAALRGT PGVRMLTDSA LQTDDGVAVA WERHAEQPVA PTGGQRDTAA SDGTAAAAVA ASDPGPATDD ALRIVPALDM RTDPPRVVLA VEWRGATIDV ARASIGPGEM LAMVEPGASA PAAGHGAMRV ILLAPHPVDG CASLADTGER APPGQPAAAC R
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