Gene Bcenmc03_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5788 
Symbol 
ID6128592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2962141 
End bp2963352 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content72% 
IMG OID641652872 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_001779399 
Protein GI170738139 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.338253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCATCGA ACCTGTCGAC CACTTCCGAC CCGGCGTCAC CCCGGCATGC CACGCTGATC 
GTGCTGTGCG CGTTGTCCGT GCTGCCGTTG AGCCTGTTCC TGCCGTCGTT GCCGGCGATC
GTGCGCGACC TGCATACCGA CTATGCGCTC GTCGCGCTGT CGCTCGGCGG CTATGCGGCG
GTGGCCGCAT CGCTCGAATG CGTGACGGGG CCGCTGTCCG ACCGGTTCGG GCGGCGGCCG
ATCGTGCTGA CGAGCGTCGC GCTGTTCGCG CTCGGTTCGC TCGGTTGCGC GATGGCGACC
GATATCCGCG TGTTTCTCGG CTGCCGGCTG ATGCAGGCGG CGATCACGTC GGTCTATCCG
GTGTCGATGG CGGCGATCCG CGACAGCGGC GGCGGCGCGC GCGCGGCGAG CCGGATCGGC
TATGCGGCGA TGGCGGCCGC GTTCGCCCCG ATGCTCGGCC CGACGCTCGG CGGCGCGCTC
GACGAGACGG TCGGCTGGCG CGCGAGCTTC TGGCTGCTGG CCGTAATCGG CACCGCGCTG
TTGGCCTGGT GCGTGCGCGA TCTCGCCGAA ACCCACACGC ACCGGCCGTC GAGCTTCGGG
CAGCAGCTTC GCGCGTATCC GGCGCTGCTG CGTGCGCGCC GTTTCTGGGC CTATGCGCTG
TGCATGGCGT TCTCGACGGG TGCGTTCTAT GCGTTCCTGG CTGGCGCGCC GCTCGCCGCG
ACAACGCTGT TCGGCATCCC GCCGGCGGAG ATCGGTTTCT ACATGGGGAC GATCACGGCC
GGTTTCGTCT GCGGCAGCTT TCTGGCCGCG CGGGTCGCGC GCCGCCATGC GCTGGCCACG
ACGATCCTGT GCGGGCGGAT CGTCGCGTGT GCGGGGCCAT TGATCGGGCT TGCGCTGCTG
TTCGGCGGCG TGACCCATGC GCTCGCGTGG TTCGGGCCGT GCGTGCTGGT CGGCGTCGGC
AACGGTCTGA GCAATCCCGG CGCCCATGCG GGCGCGGTGT CGGTACGCCC GGAACTGGCG
GGCAGCGCGT CGGGCTTGGC CGGCGCGATG ACGATCGGCG GCGGCGCCGC GCTGTCGTCG
CTGACGGGCG CGCTGCTGAC CCCGCGCAAC GCAGGCTACC TGCCGCTCGC GATGATGCTG
CTGTCGGCGG CGATCGCGCT GGCGGCCGCC GGGTGCGTGC GGGCGTTCGA CGGGAAGGAC
GCCGGACGGT GA
 
Protein sequence
MSSNLSTTSD PASPRHATLI VLCALSVLPL SLFLPSLPAI VRDLHTDYAL VALSLGGYAA 
VAASLECVTG PLSDRFGRRP IVLTSVALFA LGSLGCAMAT DIRVFLGCRL MQAAITSVYP
VSMAAIRDSG GGARAASRIG YAAMAAAFAP MLGPTLGGAL DETVGWRASF WLLAVIGTAL
LAWCVRDLAE THTHRPSSFG QQLRAYPALL RARRFWAYAL CMAFSTGAFY AFLAGAPLAA
TTLFGIPPAE IGFYMGTITA GFVCGSFLAA RVARRHALAT TILCGRIVAC AGPLIGLALL
FGGVTHALAW FGPCVLVGVG NGLSNPGAHA GAVSVRPELA GSASGLAGAM TIGGGAALSS
LTGALLTPRN AGYLPLAMML LSAAIALAAA GCVRAFDGKD AGR