| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5764 |
|---|
| Symbol | |
|---|
| ID | 6128569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2934044 |
|---|
| End bp | 2935012 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641652849 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001779376 |
|---|
| Protein GI | 170738116 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGC TCGAAAACAT GCGCCTGTTC GTGCGCGTCG TCGAAGCCGG CAGTTTTACC
GCCGTCGCGA AGGAAATCGA CGCGACCACC GCGCAGGTGT CGCGCGCGGT CTCGAACCTC
GAAGCCCACG TACAGACGCG CCTGCTGCAT CGCACGACCC GCCACCTCGG CCTGACCGAA
AGCGGCGAGC GCTATTTCGA GCGCGCGAAA TCGATCCTCG CGGAACTCGA CTACGCGAAC
GCGGAGGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGA TGCGCATCCA TGCGATGACG
GGGCTCGGTC AGAGTCATGT CGTGTCGTCG ATCGTGCGTT ACCAGGAGGA CAATCCCGAC
GTGTCGGTCG AGCTGACGCT GGCGCAGCGG ATGCCGAACC TGGTCGAAGA GGGGTATGAC
GTGTCGATCG TGACGGCGTC GCAGTTGCCC GATTCGGGCT ATGTCGCGCA GACCTGCGGC
ACGAGCTGCA GCGTGCTCGT CGCGTCGCGC GAGTATCTTG CCCGGCACGG CACGCCGCAG
ACGCCCGACG AACTGCCGAA CCACGTCTGC CTGCGCCTCG ACACGCCGGC ATCGCCGGCC
GGCGAATGGC GGCTCGAGCG CAGCGACGGC GAGGAAGCCG TCTACGAGCT GCAGCCGGCG
CCGTTCCAGG TCAACGTGCC GGACGCGCTG TGCGTCGCGG TGCGGGCCGG CCGCGGGATC
GCATGCGTGG CGCTGTATAC GGTGCTCGAC GATATCCGCG AAGGGCGCCT GATCCGCGTG
CTGCCCGAGT ACCGGCTGCA GACGGTGAGC GTCTATGCCG TCTATGCGAC ACGCCGCTAT
CTCGATGCGA AGATCCGCAC CTTCCTCGAC CACCTGCGCA CGACGCTCAC GCCCGCGCTG
GAGAACGATC TGCGCGAACT CGACCGGCTG ACGACGGAGC ACGCGCCGAG CAGCCGCCAG
CGCGCGTGA
|
|---|
| Protein sequence | MDMLENMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE
SGERYFERAK SILAELDYAN AEARNALLRP SGKMRIHAMT GLGQSHVVSS IVRYQEDNPD
VSVELTLAQR MPNLVEEGYD VSIVTASQLP DSGYVAQTCG TSCSVLVASR EYLARHGTPQ
TPDELPNHVC LRLDTPASPA GEWRLERSDG EEAVYELQPA PFQVNVPDAL CVAVRAGRGI
ACVALYTVLD DIREGRLIRV LPEYRLQTVS VYAVYATRRY LDAKIRTFLD HLRTTLTPAL
ENDLRELDRL TTEHAPSSRQ RA
|
|---|
| |