| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5507 |
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| Symbol | |
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| ID | 6128317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2649396 |
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| End bp | 2650604 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641652597 |
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| Product | porin |
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| Protein accession | YP_001779124 |
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| Protein GI | 170737864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACG GACGACGACT GACCGCAGCC GCGGCCATGC TGGGCTGCCT GCACGCACAT
GCGCAGACTT CGGGGAGCGT GACGCTGTAC GGTACCGTGG ATACCGGCAT CATCTATTCG
ACGAACCAGC AGTTCACGCG CGCAGACGGC AGCACGGGCG GCGGCCATGC GTGGCAGATG
GGCGGCGGCA ACCTGGTGCC GTCCCGCTTC GGCTTCCAGG GCGCCGAGCC GCTCGGCGGC
GGCCTCGATG CGGTGTTCAC GCTCGAGCAG CAGTTCCTGT CCGCGAACGG GCAGGCGCTG
CAAGGCGGCA CCGCATTCAG CCGGCAAGCG TGGGTCGGGC TGCGCCAGGA GGGGATCGGC
ACGCTCGGCC TCGGCCGCCA GTACGACTCG TACACCGACA TGCTCGGTGC ATACGTGTCG
AGCAACAACT GGTCGACGCC GTACGGCTCG CATCTCGGCG ACGTCGACAA CCTGAATGCC
GCGTTCAATT TCAACAACGC GGTGAAGTTC ACCAGCGCCG ATTTCAACGG GCTCACGTTC
GGCGGCACGT TCAGCTTCGG CGGGCAGGCC GGCGATTTTT CCGCGAAGCG CGGCTATGCG
GTGGCCGCGA CGTACACGCG CGCGCCGGTG GCCTTCTCGG TCGGCTACCT CGACCTGCAC
CAGCCGCTCG ACGCGGCGCT CGGCGGCGCG AGCAGCTATA TCGGCGATTT CGCGTGCAGC
AACCCGGGCG CGATGTACTG CCTGCTGCAG GATGCCGGCT CGATGCGCGC GTTCGGCGCG
GGCGGGTCGG TCACGCTCGG CGCGGCGACG GTCGCGCTGA CCTACACGCA CACGCGGCTC
GGCGACAGCC GCTATTTCTC GACCGCCGCG CAGCCGCGCA CGCAGGCGTT CACGTTCGAC
ATCGGCGAGC TGAACGTCAC GTACATGTTC ACACCGGCGC TGCAAGGCGG CGTTGCGTAC
ATCTTCAACG CCGCGCATAC GGACGGACGC GGCACGACGC GCTACCACCA GGTGAACGTC
GGCGCGAACT ACAGTCTGTC GAAGCGCACC GCGCTGTATG CGGTCGCGAT CGGCCAGGTC
GCGAGCGGCA CGGGGCTCGG CACCGATGCG GACGGCAACG CGGCGAACTA TGCGCAGATT
CCGGTGCTCG CGAACAGCAA TTCGAGCCGG CAACTGGCGG TGATGGCGGG GATTCGTGTG
AACTTTTGA
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| Protein sequence | MKNGRRLTAA AAMLGCLHAH AQTSGSVTLY GTVDTGIIYS TNQQFTRADG STGGGHAWQM
GGGNLVPSRF GFQGAEPLGG GLDAVFTLEQ QFLSANGQAL QGGTAFSRQA WVGLRQEGIG
TLGLGRQYDS YTDMLGAYVS SNNWSTPYGS HLGDVDNLNA AFNFNNAVKF TSADFNGLTF
GGTFSFGGQA GDFSAKRGYA VAATYTRAPV AFSVGYLDLH QPLDAALGGA SSYIGDFACS
NPGAMYCLLQ DAGSMRAFGA GGSVTLGAAT VALTYTHTRL GDSRYFSTAA QPRTQAFTFD
IGELNVTYMF TPALQGGVAY IFNAAHTDGR GTTRYHQVNV GANYSLSKRT ALYAVAIGQV
ASGTGLGTDA DGNAANYAQI PVLANSNSSR QLAVMAGIRV NF
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