| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5439 |
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| Symbol | |
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| ID | 6128249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2564458 |
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| End bp | 2565267 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652529 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001779056 |
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| Protein GI | 170737796 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.507551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0986241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGACC AGGCCGCGGG CTTCAACGAC GTCGCCGGCA TGCTGCGGCC GCTGCTCTAC
GTGATGCCGC GCCTGCTGCC GATCATGTTC GTCGTGCCGG TATTCAACGA GCAGATCATC
ACGGGCCTCG TGCGCAACGG GATCGCGGTC GTGATCGCCG CGTTCGTCGC GCCGACGATC
GATGCCGCGC AGGTCGCCGC GCTGCCGTTC CTGATGTGGT GCCTGCTGGT CGCGAAGGAG
GCGATGGTCG GCATGCTGCT CGCAGGTGCG TTCAGCGCGG TGCTGTTCGC GATCCAGGGT
GTCGGCTACC TGATCGACTT CCAGACCGGC AGCGGCAGCG CCGCGTTCTT CGATCCGATG
GGCGGCCACG AGGGCGGCCC GACTTCCGGA TTCCTGAATT TCGTCGCGAT CGCGCTGTTC
GTCACGGCGG GCGGGTTGCA GGTGCTCGTG CAACTGTTCG CGCAGTCGTA CGCATGGTGG
CCGATCGGCT CGCTCGGCCC CGATTTCTCG TCGATGCTGC AAACCTTCAT CGTGCGGCAG
ACCGACACGA TCTTCGAATG GATGGTGAAG CTCGCGGCGC CGGTCACGAT CGTGCTGGTG
CTCGTCGAGC TGGGCATCGG CCTGGTCGGG CGCGCGGTGC CGCAGCTCAA CATCTTCGTG
TTCTCGCAGC CGCTGAAGAG CGCGCTCGCG GTGCTCATGA TGATTCTGTT CCTGCCGGTG
GTGTACGCGT CGCTGCATTC GCTGCTGAGC CCCGACAGCG GGCTGATGGC GTTGCTGCGC
GCGCTGTTCG CCGCGCACGG CGGCGGCTGA
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| Protein sequence | MLDQAAGFND VAGMLRPLLY VMPRLLPIMF VVPVFNEQII TGLVRNGIAV VIAAFVAPTI
DAAQVAALPF LMWCLLVAKE AMVGMLLAGA FSAVLFAIQG VGYLIDFQTG SGSAAFFDPM
GGHEGGPTSG FLNFVAIALF VTAGGLQVLV QLFAQSYAWW PIGSLGPDFS SMLQTFIVRQ
TDTIFEWMVK LAAPVTIVLV LVELGIGLVG RAVPQLNIFV FSQPLKSALA VLMMILFLPV
VYASLHSLLS PDSGLMALLR ALFAAHGGG
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