Gene Bcenmc03_5387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5387 
Symbol 
ID6128197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2512026 
End bp2512961 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID641652477 
ProductLysR family transcriptional regulator 
Protein accessionYP_001779004 
Protein GI170737744 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.444509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGCA AGCTGGATCT GAATGCGGTG CGTGTGTTCG TGACGGTCGT CGATGAAGGC 
AGCTTTGCCG GCGCCGCGCG CGTGCTCGCG CTGCCGGGTT CCAACGTGAG CCGTTATGTG
GCGCAACTGG AGTCGCGGCT CGGCGTGCGT TTGCTCGAGC GCAGCACGCG CCACCTGCGG
ATGACCGAGG CCGGGCGGCT GCTGCACGAG CGTGCGCGGC CGATGCTCGA CGCGCTGACG
CAGGCCGAAT GCGAGCTGAC GTCGCAGCAA ACGGAATTGC GCGGCGTGCT GAAGCTTTGC
GTCCCGGGCG AAATCGGGCC GCGCATGCTG GGGCCGATCG TCGCGGAATT CGCGAGCCAC
CATCCGCGTG TCGAGATCGA CTGCGACACC AGCCTCGCTG GCGTGTCGAC GCTGCGCGAC
GATATCGACC TGTCGATCAT CGTCAATCGC GGCAAGCTGG ACGACAGCGC GTTCGTCGTC
AGGCCGCTCG TGAGTTTGCC GAGCGTCGTC GTGGCCGCGC CGTCACTGGT CGCGCGGGTC
GGGATGCCAG GCCTGACGGA GCAGCTCAAG CAGTTGCCGT GCATCACGAC GTTGAGCACG
CTGAAAGGGC AGCCGTGGCA ATTCGCCGAT CGCGACGGAC GGATTCACAA GATTCCGGTG
GCGAGCCGAT ATCGCGTCAA TAGCGGCGAG ATGGCGGGCC TCGCGGCGGT GAACGGGATC
GGCTTCGCGA TTCTGGTCGA ACGCGCGTGC GCGGTGGAGC TTGCCGAAGG GCGGCTGGTG
CGCGTGCCGC TGGAGATGGC GCCGGCGCCG CTGCAGCTGC ATGCCGCTTA CGCGAGCCGG
AATTCGGTCA ACGCGAAGAT TCGCGCGTTG CTGCAGCTGA TGCAGCAACG ATTGGCGACG
GAGGAGGCGC TGCCGTCATC GAGACCGCTT CGGTAG
 
Protein sequence
MRSKLDLNAV RVFVTVVDEG SFAGAARVLA LPGSNVSRYV AQLESRLGVR LLERSTRHLR 
MTEAGRLLHE RARPMLDALT QAECELTSQQ TELRGVLKLC VPGEIGPRML GPIVAEFASH
HPRVEIDCDT SLAGVSTLRD DIDLSIIVNR GKLDDSAFVV RPLVSLPSVV VAAPSLVARV
GMPGLTEQLK QLPCITTLST LKGQPWQFAD RDGRIHKIPV ASRYRVNSGE MAGLAAVNGI
GFAILVERAC AVELAEGRLV RVPLEMAPAP LQLHAAYASR NSVNAKIRAL LQLMQQRLAT
EEALPSSRPL R