| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5288 |
|---|
| Symbol | |
|---|
| ID | 6128098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2391347 |
|---|
| End bp | 2392288 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652377 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001778905 |
|---|
| Protein GI | 170737645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0305089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.89359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCGA CCTCCTTCGC TTCGTCACGA CGTCACCCGC CGGTGCTCGT GCCCGGCAAT
CATCCGGGTG TGGTGCACAT CGACGCGGGC ATGAAACTCA TGAGCGGCAC GCTGTGCTCG
GATAGCCGCG ACTGGTACGA GGAGCCGCTC GAAAAAGGGC TGAAGCTCGT CCTCGTGCAG
AGCGGGCAGT TGCGCTGCCG CGTGCCGGGC CAGCCCGAGC AATGCATCAA GGGGCCGGGC
CTGTGCGTGA TCGCCAACGA CGGCGAATTC ACCACCCACC AGATCTACGA CCGCGACGTG
CCGCTGCGCT ACACGATCGT GCAGCTGGGC CTCGATGCGC TCGACCGCAA CCTGAGCCTG
CTGCCGGAGA AGATGCTCGC GCCGACGGGA GGCGATCCGC GCATCGTCAG TTGCCCGGCG
TCGAAGGCGC TGCAGGCGCT CGCCGTGCAG ATCGCCACCT GCCCGTTCGA GGGCGCGGTG
CGCGAGTACT ACCTGAAGGC GAAGGCGTTC GAGCTGACCG CGCTGAGCGC GCAGTTGCTG
GCCACGCAGC GGCAGCATGC GCCGGCCGAC GTGCGCGTCA CGTCGTCGGA TGTCGAGCGC
GTGTATGCGG CGAGCGACAT CCTGACGCGC GAGCTTCAGC ATCCGCCGAC GCTGGACGCG
CTCGCGAGCC GCGTCGGGAT GAATTCGCGC AAGCTGACGG CCGGCTTCCG CAAGGTGTTC
GGCACGAGCG TGTACGCGTA TCTGCAGGAA TACCGGCTGC GGACCGCGCA CGCGATGCTG
TGCGCGGAGG ATGCGCACGT GTCGACCGTC GCGTACCGCG TCGGCTACAG CCCCGCGCAT
TTTTCGATCG CGTTCCGCAA GCGCTACGGC ATTTCGCCGA GCGATATCCG CGTGTCGTCG
AACGCGATCG ACAACGAGGA ACTGGCGGGC GCGGCGATCT AA
|
|---|
| Protein sequence | MRSTSFASSR RHPPVLVPGN HPGVVHIDAG MKLMSGTLCS DSRDWYEEPL EKGLKLVLVQ
SGQLRCRVPG QPEQCIKGPG LCVIANDGEF TTHQIYDRDV PLRYTIVQLG LDALDRNLSL
LPEKMLAPTG GDPRIVSCPA SKALQALAVQ IATCPFEGAV REYYLKAKAF ELTALSAQLL
ATQRQHAPAD VRVTSSDVER VYAASDILTR ELQHPPTLDA LASRVGMNSR KLTAGFRKVF
GTSVYAYLQE YRLRTAHAML CAEDAHVSTV AYRVGYSPAH FSIAFRKRYG ISPSDIRVSS
NAIDNEELAG AAI
|
|---|
| |