Gene Bcenmc03_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5173 
Symbol 
ID6127984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2263083 
End bp2263844 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID641652264 
ProductABC-2 type transporter 
Protein accessionYP_001778792 
Protein GI170737532 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.108513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC AAGGAATCCG CGCGATCTAC CGCGCAGAAA TGGCCCGCAC GCGCCGCACG 
CTGATGCAGA GCATCATCGC GCCGGTGATC TCGACGTCGC TGTATTTCGT CGTGTTCGGC
TCCGCGATCG GCTCGCGCAT CAGCGACGTG AACGGCATCG GCTACGGGTC GTTCATCGTG
CCGGGCCTCG TGATGCTGTC GCTGCTGTCG CAGAGCATCT CGAACGCGTC GTTCGGCATC
TACTTCCCGC GCTTCACCGG CACGATCTAC GAGATCCTGT CCGCACCCGT GTCGTACTGG
GAGATCGTGA TCGCGTACGT CGGCGCGGCC GCGTCGAAGT CGATCCTGCT CGGCGTGATC
ATCCTCGCCA CGGCCGGCCT GTTCGTGCCG CTGCACATCC TGCATCCGTT CTGGATGGTG
CTGTTCCTGG TGCTGACGGC CGTCACGTTC AGCCTGTTCG GCTTCGTGAT CGGCATCTGG
GCCGACAGCT TCGAGAAGCT GCAGCTCGTG CCGCTCTTGA TCATCACGCC GCTCACGTTC
CTCGGCGGCA GCTTCTATTC GGTCGACATG CTGCCGCCCG CGTGGCGCGT CGTCACGCTG
TTCAACCCGA TCGTCTACCT GATCAGCGGC TTTCGCTGGT CGTTCTACGG GATCGCCGAC
GTGCACGTGT GGATCAGCCT CGCCGCGACC GCGCTGTTCC TCGTGATCCT GCTCGCGATC
GTCGCGTGGA TGTTCCGCAC CGGCTACAAG CTGAAGAATT GA
 
Protein sequence
MNWQGIRAIY RAEMARTRRT LMQSIIAPVI STSLYFVVFG SAIGSRISDV NGIGYGSFIV 
PGLVMLSLLS QSISNASFGI YFPRFTGTIY EILSAPVSYW EIVIAYVGAA ASKSILLGVI
ILATAGLFVP LHILHPFWMV LFLVLTAVTF SLFGFVIGIW ADSFEKLQLV PLLIITPLTF
LGGSFYSVDM LPPAWRVVTL FNPIVYLISG FRWSFYGIAD VHVWISLAAT ALFLVILLAI
VAWMFRTGYK LKN