| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5152 |
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| Symbol | |
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| ID | 6127963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2238761 |
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| End bp | 2240644 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641652243 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001778771 |
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| Protein GI | 170737511 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT CGCTTGACGC CGGGCCCGCA CGCGAACGCG ACGGCGCGCC GCCGTGTCGC
GGTGCCCACG CCGACCGCGC CGCGCATCTG CATGCGCTGA TCGCGCTGGG CATCGATCGC
GGCTACGTGA CGCTCGGTGA AATCGCCGAT GCGTTGCCCG ACGACGCGAC CGACGGCGCG
GATGTGGACG CCGCCGCGTC GATGCTGCGC GAGCTCGGCA TCGACGTGCG CGAGCATGCC
GGCGCGCATA CCACATGGAC GCTCGATCGT CATTTCGCGC AAGTGACGGA AGTCGCGTCG
CCGCTCGACG ACGCATCGAC GCCGCTCGCG GCCGACGATC TGCTTGCGGG CCGCACCAAT
GATCCGATCC GGCTCTATCT GCGGGAAATG AGCGCGACGC CGCTGCTCGA ACGCGACGAA
GAGATCGCGC TCGCGCTGCG TCTGGAAAGC GGCCGCGCAG CATGCATCGA CGCGTTGAGC
CGCGATCCGG CGGCACTCGC CGCCGTCGCG GCGATCGCGG ACGACATTCG TGCCGGCAAG
GTGGCGGCGT CGGCTTACGT GACGGGGTTC GCCGGCGATG CCGAATCGCC TGCAAGTGCG
CCGGCGACGT TGCCCGACGA TCCGGCCACC GAATCACCGG CGCCCAACGA CGACGCCGAT
CTTTCCCTCG ACAGCCCGGC GTGGCGCGAT ACGGTCGTCG ACGCGCTCGA ACGTGTCGGT
GCGCTGGCGC CCGCGATGCA GCGTGCATTG CATGCCGACG ATTTCGCGTC GGCCGCTTAC
CGGACGCTGC TGCGCGAGGC GACCGCGTCG ACCGGCCGCA TCCGCTTCAC CTCGCGCGCG
ATCGAACGGA TCGGGCAAGC GAACGGCGAG CGTGCGACTC GGGCACGTAC GTTCGAAAAA
CGACTCGTCG ATACGCTGGC CGCCGCGGGC ATACGTGCCG AATCCGCGCA CCATGATCTC
TTCACGCCGT GCGACGACGT ACGCGCATGG CTACACGCCT GCCGCGCCGC GCACCCTGAC
TGCGCCGCTG CGCTCGCCCG CCACGCGCCG GCACTGATCG ATGCGCGCGG CGCGCTCGCG
CGCCTCGCCG GCCAGTCTGC GCTGCCGCTC GACATCGCGA TCGCGCTCGA TGCGCGGCTC
GCGCGTATCG AGCGGGCGAT GCAACCCGCG AGAACGAAGC TGTTCCAGAG CAATCTGCGG
CTCGTCGTGT CGGTCGCCAA ACGCTATGCC GATCGCGGCT TGCCATTCTC CGATCTGATC
CAGGAAGGCA ATATCGGCCT GATGAAAGCC GTCGATCGCT ACGATCACCG GCGCGGCTTC
AAATTCTCGA CGTATGCGAC GTGGTGGATC CGGCAGGCGA TCACGCATGC GCTCGCCGAT
CTGGGCCGCA CGATACGCGT GCCCACGCAT ACGGTCGATA CGCTGAACAA ACTGTCGCGG
CTCGCGCGAC TCCACCGGCA ACGCACCGGC GACGTCGCCG ACGCGCGGGC GCTCTCCACG
CAGATGCGGC TGCCGGTCGA CAAGGTGCGC GAGCTGATGA GCATCGTGCG CGAGCCGATC
TCTGCCGACC TGCCGGTTTC GCCCGATCAC GACCTCACAC TGTGCGACGT CACGATCGAC
CCCGACGCGC CGACGCCGGA AGAAGCCGCG AGCGCCGGTC AGTTGCGTGC GGTGGTTGCC
GAGCTGATCG ACAGCCTCCC GGTACGCGAG GCGTGGATTC TTCGCCTGAG GTACGGCATC
GATGTCGACA ACGAATATTC GCTGCGCGAG ATCGGCCGGC AACTGAACCT GTCGGCCGAG
CGCGTTCGTC AGCTCGAGGT ATCGGCGCTC GAACGCATCC GGCAATTCAG GCACGCACCG
GCGCTGCGCT CGTTGCTCGC CTGA
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| Protein sequence | MPSSLDAGPA RERDGAPPCR GAHADRAAHL HALIALGIDR GYVTLGEIAD ALPDDATDGA
DVDAAASMLR ELGIDVREHA GAHTTWTLDR HFAQVTEVAS PLDDASTPLA ADDLLAGRTN
DPIRLYLREM SATPLLERDE EIALALRLES GRAACIDALS RDPAALAAVA AIADDIRAGK
VAASAYVTGF AGDAESPASA PATLPDDPAT ESPAPNDDAD LSLDSPAWRD TVVDALERVG
ALAPAMQRAL HADDFASAAY RTLLREATAS TGRIRFTSRA IERIGQANGE RATRARTFEK
RLVDTLAAAG IRAESAHHDL FTPCDDVRAW LHACRAAHPD CAAALARHAP ALIDARGALA
RLAGQSALPL DIAIALDARL ARIERAMQPA RTKLFQSNLR LVVSVAKRYA DRGLPFSDLI
QEGNIGLMKA VDRYDHRRGF KFSTYATWWI RQAITHALAD LGRTIRVPTH TVDTLNKLSR
LARLHRQRTG DVADARALST QMRLPVDKVR ELMSIVREPI SADLPVSPDH DLTLCDVTID
PDAPTPEEAA SAGQLRAVVA ELIDSLPVRE AWILRLRYGI DVDNEYSLRE IGRQLNLSAE
RVRQLEVSAL ERIRQFRHAP ALRSLLA
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