Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4887 |
Symbol | |
ID | 6127699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1911466 |
End bp | 1912662 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641651974 |
Product | major facilitator transporter |
Protein accession | YP_001778507 |
Protein GI | 170737247 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTT CATCTTCTTC ATTCGTTTCC TCGCCGCGCC AGACAGGAAG CGCGGTAGGC GCCATGGCGC TGTGTGTGGC GATGCTGATC GCCTCGGAGT TCATGCCGGT CAGCTTGCTG ACGCCGATTG CGCATGACTT GAATGCAACC GAGGGCATCG CTGGTCAGGC GATCTCGATT TCCGGTTTCT TCGCCGTCCT GGCCAGCTTG TTCGTCGCGC CGCTCGCCGG GCGTTTCGAT CGTCGGCATG TGTTGATGAG CATGACGGTT CTGATGCTGA TATCGATCGT GCTGATCGCC GTGTCGCCGA ACTTCGCGGT GCTGATGATT GCGCGGGCGT TCCTGGGGCT TGCGGTCGGA GGTTTCTGGT CGTTGTCCAC AGCCACGGTG ATTCAACTGG TACCGGCACA ACGCGTACCC AAGGCGCTCG GAACGATCTA TATGGGTAAT GCGATCGCGA CAGCCTTTGC TGCTCCGATT GGCGCGTACG TCGGTGGCCA TTTGGGTTGG AGATTCGTAT TTGCTGCGCT GGTGCCTTTG GTACTGGTGA ATCTAGTATG GCAAGCGGTA AGCCTGCCGA GCATGCCCCC CCGAGCAGCC ATTCCCATCA CCCGGTTGTT CGGACTGCTG AAGCGCCGAA ACGTTGCGGT CGGAATGGTT GCGGTCATGC TCACCTTCGC CGGCTCCTAC GGGACGTTCA CCTACTTCCG TCCGTTTCTG GAAGCGGTAA CCGGAGCAGA CGCCAATCAA CTGTCGATGC TATTGCTCGG ATTGGGCGTG GCCGGTTTTG CTGGGACCCA TTTCGCGGGC ACGATGCTGC ACCGCAACCA TGTTTACCCT CTGTTGCGCT GGTTGCCGAT TGCGCTCGCC GCCGCGACGC TGGGATTGGT GCAGTTCGGC CACCTGTTCG CGGGCGCCGC GACGATGATG ATCGGCTGGG GCGCCGTGAA TGCAGCGATT CCCGTCACGT GGTCCACCTG GCTGGCGAAG GAAATCGACG ACGAGCCCGA AAGCGGTGGG GGCTTGATGG TCGGATCGAT TCAGCTGGCG ATCATGCTGG GCGGCGCGCT AGGGGGAGAA CTCCTCGATC GCATCGGCGT GTTCGCTCCG TTGATGGGCG GGGTCGTGTT GCTCGTTCTT TCGGCATTGC TCATTGGTAA TGGTGCGCGC CTGAAGAAGA CCGAAAAGCT CGACTGA
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Protein sequence | MTPSSSSFVS SPRQTGSAVG AMALCVAMLI ASEFMPVSLL TPIAHDLNAT EGIAGQAISI SGFFAVLASL FVAPLAGRFD RRHVLMSMTV LMLISIVLIA VSPNFAVLMI ARAFLGLAVG GFWSLSTATV IQLVPAQRVP KALGTIYMGN AIATAFAAPI GAYVGGHLGW RFVFAALVPL VLVNLVWQAV SLPSMPPRAA IPITRLFGLL KRRNVAVGMV AVMLTFAGSY GTFTYFRPFL EAVTGADANQ LSMLLLGLGV AGFAGTHFAG TMLHRNHVYP LLRWLPIALA AATLGLVQFG HLFAGAATMM IGWGAVNAAI PVTWSTWLAK EIDDEPESGG GLMVGSIQLA IMLGGALGGE LLDRIGVFAP LMGGVVLLVL SALLIGNGAR LKKTEKLD
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