| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4867 |
|---|
| Symbol | |
|---|
| ID | 6127679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1890860 |
|---|
| End bp | 1892203 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641651954 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001778487 |
|---|
| Protein GI | 170737227 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.132295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA GGTTCGATCG TTCATTCGGC ATCGCGCTTG CAGCGGCCAT CGTCGCGGGC
AGCGCAGCGA CGGCGTCGTT CGCGCAAGCC GCGCCGTCTG CCGCGCTGCC CGCCGCCGCA
ACGTGCGGCG GCGTCGCGCT GGCCACGTGC CCCGCACCGT TCGACGCGAC GCTGCCCGAC
CCGAAGCGGA TGCTGACGTG GAGCCAGCCG GATCGCGTGA TCGGCTTTCG CAACGACTAT
CGCAACTATG CGGGCGACGT GTTCCACCAT GGCGCGGCCA CGCCGTTCGT CAACGCCGCC
CGCATGCTGA CCGACGTGTC GTACGAAGTG CACGGCAAGC GCTACACGCT GAAGGACTAC
CTGAAGCATC AGGACGTGGC CGGCCTGCTG GTGCTGAAGG ACGGCAAGAT CGCGTACAAG
TATCTCGGCG ACGGCAACAC CGATACGACG TTGTGGACGT CGCGCTCGGT CGGCAAGTCG
GTCGTGTCGA CGCTCGTCGG GGTCGCGTTG CAGGAAGGGA AGATCAAGTC GCTCGACGAT
CGCGTGACCG ATTACGAGCC GGACCTGAAG GGCACCGCGT GGGACGGCGT GACGCTGAAG
CAGTTGATCC AGCATACGTC CGGTGTCGCG TGGAACGAGA GCTATACGAA TCCGGACTCC
GATTTCGCGA AGCTCACCCA ATGCGAGGCG CGGCCCGGCA CGTACGCGTG CGTGCGCACG
CTGGTCAAGG GGCTCGGCCG TGCGCATCCG CCCGGGCAGA CCTGGTCGTA CAGTTCCGGC
GGCGCGTGGC TGCTCGGCGA CGTGCTCGAG CGCGCGACCG GCATGTCGCT CGCCGATTAT
CTCGAAAAGA CGATCTGGAA GCCGTACGGG ATGGCGAGCG ACGGCGTGTG GCACGCGTAT
CGCGAAGGGC AGCACGACGT CGGTGCGCAT GGTTTCAACG CGACGCTGGA AGACTGGGGG
CGCTTCGGCG AATTCGTGCT GGGTGGCGGC AAGCTGCCCG ACGGCACGCG GATCTTGCCG
GACGGCTGGC TCGACCGGGC GTCGGACTGG ACCCGGGCGC GGCAGTCGGT GTCGGCCGGG
CACCCCGACG GCATTTACGG CTACCAGTGG TGGAACAACG CGGTGCCGGT CGATGCGAAG
GGCACGGACC CGACGCCCGC GGCGTCGATG CGTGGCGCGC TGTGGGCGCT CGGCATCTTC
GGCCAGGTCA TCATGGTCAA CCGCGCCGAA CATCTCGTGA TCGTGCAATG GTCGACGTGG
CCGAAGGCTG AGCCGTCGTT CGATACGCTG CCGCTCGAAG CGTCGGTGTT CTACAGCGCG
ATCGCGCGGG AGTTGCGGCA TTGA
|
|---|
| Protein sequence | MKPRFDRSFG IALAAAIVAG SAATASFAQA APSAALPAAA TCGGVALATC PAPFDATLPD
PKRMLTWSQP DRVIGFRNDY RNYAGDVFHH GAATPFVNAA RMLTDVSYEV HGKRYTLKDY
LKHQDVAGLL VLKDGKIAYK YLGDGNTDTT LWTSRSVGKS VVSTLVGVAL QEGKIKSLDD
RVTDYEPDLK GTAWDGVTLK QLIQHTSGVA WNESYTNPDS DFAKLTQCEA RPGTYACVRT
LVKGLGRAHP PGQTWSYSSG GAWLLGDVLE RATGMSLADY LEKTIWKPYG MASDGVWHAY
REGQHDVGAH GFNATLEDWG RFGEFVLGGG KLPDGTRILP DGWLDRASDW TRARQSVSAG
HPDGIYGYQW WNNAVPVDAK GTDPTPAASM RGALWALGIF GQVIMVNRAE HLVIVQWSTW
PKAEPSFDTL PLEASVFYSA IARELRH
|
|---|
| |