| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4603 |
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| Symbol | |
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| ID | 6128840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 1597504 |
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| End bp | 1599501 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641651698 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001778231 |
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| Protein GI | 170736971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.039982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000685896 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGCCC ATCGCCGCCG TCCGTCTTCG TCCGTCCGAT CGCCCGCATC GAAACGGGTA
TCGCGCCGCG CCTTCATCGG CTGGACCGGC GCACTTGGCG GCGGCGCGAT GCTCGGCGGA
CCGTTCGCGG CCACCTGCGC GCTGGCGGCG GGCGCGACAC CGAATGCGTC GGCGGTCGAT
CTCGTGTGGG GCGAGCACGG CGCGGCGGCG CGCATTGCCA CGTCGCTCGC GCACGTGTCG
CGGCTCGCGC GGCGCGGACG CGACTTCGAC GTGACGCACT ACGGCGCGCG CCCGTGCGCG
ACGGTTGCGC AGACGTCGCC GTACCCGGCG GCGAAATCGC CCGTCAGCCC CGGCTCCGAA
CTGACGACCG CGCCCGGCGC ATTCGATTCG CGCCCGGCGT TTCTCGCGGC GATCGACGCA
TGCCGGCGCG AAGGCGGTGG CCGCGTCGTC GTGCCGCCCG GCAACTGGTA TTGCGCGGGG
CCGATCGTGC TGCAGAGCAA CGTCACGTTC CACTTGAGCG CGAACTGCAC GATCTACTTC
AGCCCGAACC CGGCCGACTA CGCGAAGGAC GGCCCGGTCG ATTGCGGCGC GAACGGCCGG
CTGTACTACA GCCGCTGGCA GGCGAACGAT TGCCTGAACT ACGGCGCGCC CGTCTATGCG
CGCAACGCGA CCAACATCGC GCTGACCGGC GAAGGCCCGA CGTCGGTGCT CAACGGGCAG
GCGATGACGC CGTTCTCGGG CAGCGGCGCG AACAGCGTCT GCTGGTGGAC CTACAAGGGC
TCGTCGGGCG CGTACGGCGC GAGCGCGACG GTGCCGGCAC AGAACTCGGC GAATCCGAAC
AACGTCGACC TGCGCATCGT CGCGCCCGCG ATTCCCGACG CGCTCTACGC GCTGCTGACG
TCGCCCGTCA CGCCGTGGCA GCAGGACCAG AACTACCTGC CCGCGCTGTC CGAGGCCGGG
GTGCCGGTCG AGCGGCGCAT CTTCGGCCTC GGCCACTACC TGCGGCCGTG CATGGTCGAA
TTCATCGGCT GCACGAACGT GCTGATGGCG AACTACCAGA CGCAGAACAC GCCGTTCTGG
CAGCACCATC CGACCGCCAG CCGCAACGTC GTGATCCGCG GCGTGACGAC CAACAGCATC
GGCCCGAACA ACGACGGCTT CGATCCGGAC GCATGCACCG ACGTGCTGTG CGAGGACTGC
ACGTTCAACA CCGGCGACGA CTGCATCGCG ATCAAGTCGG GCAAGGACCG CGACACCGAA
TACGGCCCCG CGAAGCGGCA CCTGATCCGC AACTGCACGA TGAACAGCGG GCACGGCGGC
ATCACGCTCG GCAGCGAGAT GGGCGGCGGC GTCGAGCAGA TCTACGCGAC GAACCTGTCG
ATGCTGAACG CGAACTGGCA GACCAATCCG CTGAACATCG CGGTTCGCGT GAAGACCAAC
ATGAACCGCG GCGGATACGT GAAGGATTTC CACGTGAAGG GCGTCACGCT GCCGAACGGC
GTGACGCTGA AGGGCGGCGG CTACGGCAGC GCGCTGCTTG CGGGCAGCCC GGTCAACGCG
AGCGTGCCGC TCGGCGTCGT GACGCCGTCG GCCGGCAATC CGTCCGCGGC GCAGGGCGGC
ATCGTCACGT TCGACTGCGA CTACCAGCCG GCGAACGATG CGGTGCGCAC GCGCGCACCG
GTCGTGCAGA ACGTGACGAT CGCCGACGTG AAGGCGAGCA ACGTGACGCT GAACGGCGTG
ACCGCGTCGT GTTTCCAGGC GATCGTCGCG CAGGGGCCGG TCGCGTTCGA CTACAACGGC
ACGCCGCCGA CGCCGGCCGT GCAGCCGATC TCCGGCGTGA CGATCAGCAA TTGCGACTTC
GGCACGCCGG TCGCGTCAGG CGCGCCGACG GTCACGTCGC CGGGGCCGAT CTATGCATTC
AATGTGAGCG CGATGACGCT GACGAACGTG ACGATCGCCG GGCAGGTCGT CAACACGACG
ATCACCGACA AGCGGTAG
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| Protein sequence | MAAHRRRPSS SVRSPASKRV SRRAFIGWTG ALGGGAMLGG PFAATCALAA GATPNASAVD
LVWGEHGAAA RIATSLAHVS RLARRGRDFD VTHYGARPCA TVAQTSPYPA AKSPVSPGSE
LTTAPGAFDS RPAFLAAIDA CRREGGGRVV VPPGNWYCAG PIVLQSNVTF HLSANCTIYF
SPNPADYAKD GPVDCGANGR LYYSRWQAND CLNYGAPVYA RNATNIALTG EGPTSVLNGQ
AMTPFSGSGA NSVCWWTYKG SSGAYGASAT VPAQNSANPN NVDLRIVAPA IPDALYALLT
SPVTPWQQDQ NYLPALSEAG VPVERRIFGL GHYLRPCMVE FIGCTNVLMA NYQTQNTPFW
QHHPTASRNV VIRGVTTNSI GPNNDGFDPD ACTDVLCEDC TFNTGDDCIA IKSGKDRDTE
YGPAKRHLIR NCTMNSGHGG ITLGSEMGGG VEQIYATNLS MLNANWQTNP LNIAVRVKTN
MNRGGYVKDF HVKGVTLPNG VTLKGGGYGS ALLAGSPVNA SVPLGVVTPS AGNPSAAQGG
IVTFDCDYQP ANDAVRTRAP VVQNVTIADV KASNVTLNGV TASCFQAIVA QGPVAFDYNG
TPPTPAVQPI SGVTISNCDF GTPVASGAPT VTSPGPIYAF NVSAMTLTNV TIAGQVVNTT
ITDKR
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