| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4430 |
|---|
| Symbol | |
|---|
| ID | 6127256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1403954 |
|---|
| End bp | 1404826 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641651531 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
|---|
| Protein accession | YP_001778064 |
|---|
| Protein GI | 170736804 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.19045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTTG CAATCTATAA AAAGAATGGG CACCGCGGCA TCGCGGTGGA GCATAGCGGG
CAATGGTTCG GGCTGACCGC TGAGGACACC GCTTATCCGG GCGATCTGGA TTCGCTGCTG
GCGCAGGGCG CCGACCTTGC CGAAGTTGCC GCGCGTCTCG CGCGTGGAAC GCCGGTCGAT
CTTGATGCGG TACGCGTACT GCCGCCGTTC GGGCGGCCCA ACAAGATCCT ATGCGTTGGC
TTGAACTACC TCGACCACTC GATGGAAACC GGGTTTGCGA AGCAGACTTA TCCAACCGTG
TTTGCGCGGT TCGCATCGAG CCTGATTGGC CACGACCAAC CGATCGCGTT GCCGGCACAG
TCGTCTCAAC TCGACTACGA GGGCGAGCTG GTGGCGGTGA TCGGCAAGGC CGGCCGCGGC
ATCACTCGCG AGCGTGCACT CGATCACGTC GCCGGTTATT CGCTTTTCAA CGACGTCACG
CTGCGTGATT ACCAGTTCCG CACTCCACAG TGGACGATGG GGAAGAACTT CGACGGAACC
GGAGGATTCG GGCCGTGGTT CGTCACGGCC GATGAACTGC CGCGCGGCTG CAAGGGGCTG
CGGATTCAGA CGCGCTTGAA CGGTGCGGTT GTGCAGGAGG CTTCGACGTC GGACATGATC
TTTGATATCG AGACACTCGT CGTGATGTTG AGCGAAGTGA TGACACTTCA GGCTGGTGAC
TTGATCGTCA CGGGTACGCC TGCCGGCATT GGGATGGCGC GCGAACCGCA ACTCTGGATG
AAAGCCGGTG ACGTGTGCGA AGTCGAGATC GAGCAGCTCG GCGTGTTGCG CAACGCGGTC
ATGCCGGCGG CGATGGTTCG GTGTGACGCC TGA
|
|---|
| Protein sequence | MRFAIYKKNG HRGIAVEHSG QWFGLTAEDT AYPGDLDSLL AQGADLAEVA ARLARGTPVD
LDAVRVLPPF GRPNKILCVG LNYLDHSMET GFAKQTYPTV FARFASSLIG HDQPIALPAQ
SSQLDYEGEL VAVIGKAGRG ITRERALDHV AGYSLFNDVT LRDYQFRTPQ WTMGKNFDGT
GGFGPWFVTA DELPRGCKGL RIQTRLNGAV VQEASTSDMI FDIETLVVML SEVMTLQAGD
LIVTGTPAGI GMAREPQLWM KAGDVCEVEI EQLGVLRNAV MPAAMVRCDA
|
|---|
| |