Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4388 |
Symbol | |
ID | 6127215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1360316 |
End bp | 1361608 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641651490 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001778023 |
Protein GI | 170736763 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3447] Predicted integral membrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCA AACGATCGCG GCCGGGGCTC GTCGCCGCGC TGCTCTGGGC GGCGCTGTAT CTCGCGACCG GCTACATCTC GCACGAATTC AACGGCCCCG TCCGGCTGAC GGGCTATATC TGGCTGCCGG CCGGTGTGAC GGTCGGCGCA TTCATGCTGC GACCGATGCG CGAATGGCTG ACGCTGGCCG GCGCATTCCT CGTCGGGCAG CTCGCGCTGT CCGCGATCGA GCACGGCAGC CTCGTCAACG CGGTGCTGTT CACGGTGGAC GAGGTCGGTG CGGCCGCACT CGCGGTCTGG CTCGTGCAGC GCGTGCGCTT CTCGCTCGAA GGGCTGTATT TCCTGCGCTC GGTGATTCTG GCCGGCTTGA TCGCGGGCGT CGTCGGCGCG ATCGGCGGCG CGGCGTGGTA CACGACGCTC AAGGGTGCGC CGTTCTTCGA CGTGTGGTCG GTGTGGGCCG CGTCCGATTT CGTCGGCGTG CTGCTGGTCA CGCCGGTGCT CGCGTCGTGG TCGCGCTTTC GCGCGCACCG CTCGGGCGAC CACGAGCGCT TCGACCTGGT GCTCGGCATC GTCGCGTTCG CGTTGCTCGC GGTCGTCGCG CTCGTGATCT TCGACGGCGA TACGTCGCGG AAATTTGGCA CGGGCGCGGG CTTCGCGCTC ACGTATGTGC CGCTGTTCCT GACGGTCGCG GTGACGCTGC TGCTCGGCGG CCGTGCGGGC TCGTCGTCGG TGCTGGTGCT CGCGCTGATC GTGATCGAGC AGACCGCGCA GGGCGACGGC CCGTTCGCGT CGCTCCACGA GCATTACGGC AGTGCGCTGC TCGAAGCGCA GCTCTATCTG GCGGTCGCGT CGCTGCTGGT GCTGACGGTG AGCACGCTGA AGACGACGCG CGAGCGCGTG CACGAGCATG CCGCGGTGCT GCAGAACAAC ATGGAGCTCG CGCTCGCGAG CGCCGGCCAG ATCGCGTACG TGCTCGATCC CGAGTCGGGC CGGATCGAAT GGAGCGGCGA CGTCGAGCGC GTGTTCGGCG TCGGCGTCGA CGCCGCGCAG ATCGCGAGCG TGCCGCTCGT GCTCGAACGC GTGCAGCCGG GCGACCGCGA CGCGTTGCGC GACTACTGGA ATGCGGAGAT CGCGGGCGAG GACCGCGCGT CGCTGTCGCT GCGCATCGTG CTGCGCGACG GCGGCACGCG GACGATCACC GACCACGGCG CGCCGTTGCT CGATTCGAAC GTCGACGTGA CGGTGGTGGC GGGCGTGTGG CAGCTCGAAC GCGTGTGGCC GGCGGACGAA TGA
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Protein sequence | MDTKRSRPGL VAALLWAALY LATGYISHEF NGPVRLTGYI WLPAGVTVGA FMLRPMREWL TLAGAFLVGQ LALSAIEHGS LVNAVLFTVD EVGAAALAVW LVQRVRFSLE GLYFLRSVIL AGLIAGVVGA IGGAAWYTTL KGAPFFDVWS VWAASDFVGV LLVTPVLASW SRFRAHRSGD HERFDLVLGI VAFALLAVVA LVIFDGDTSR KFGTGAGFAL TYVPLFLTVA VTLLLGGRAG SSSVLVLALI VIEQTAQGDG PFASLHEHYG SALLEAQLYL AVASLLVLTV STLKTTRERV HEHAAVLQNN MELALASAGQ IAYVLDPESG RIEWSGDVER VFGVGVDAAQ IASVPLVLER VQPGDRDALR DYWNAEIAGE DRASLSLRIV LRDGGTRTIT DHGAPLLDSN VDVTVVAGVW QLERVWPADE
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