Gene Bcenmc03_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4388 
Symbol 
ID6127215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1360316 
End bp1361608 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content70% 
IMG OID641651490 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001778023 
Protein GI170736763 
COG category[T] Signal transduction mechanisms 
COG ID[COG3447] Predicted integral membrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA AACGATCGCG GCCGGGGCTC GTCGCCGCGC TGCTCTGGGC GGCGCTGTAT 
CTCGCGACCG GCTACATCTC GCACGAATTC AACGGCCCCG TCCGGCTGAC GGGCTATATC
TGGCTGCCGG CCGGTGTGAC GGTCGGCGCA TTCATGCTGC GACCGATGCG CGAATGGCTG
ACGCTGGCCG GCGCATTCCT CGTCGGGCAG CTCGCGCTGT CCGCGATCGA GCACGGCAGC
CTCGTCAACG CGGTGCTGTT CACGGTGGAC GAGGTCGGTG CGGCCGCACT CGCGGTCTGG
CTCGTGCAGC GCGTGCGCTT CTCGCTCGAA GGGCTGTATT TCCTGCGCTC GGTGATTCTG
GCCGGCTTGA TCGCGGGCGT CGTCGGCGCG ATCGGCGGCG CGGCGTGGTA CACGACGCTC
AAGGGTGCGC CGTTCTTCGA CGTGTGGTCG GTGTGGGCCG CGTCCGATTT CGTCGGCGTG
CTGCTGGTCA CGCCGGTGCT CGCGTCGTGG TCGCGCTTTC GCGCGCACCG CTCGGGCGAC
CACGAGCGCT TCGACCTGGT GCTCGGCATC GTCGCGTTCG CGTTGCTCGC GGTCGTCGCG
CTCGTGATCT TCGACGGCGA TACGTCGCGG AAATTTGGCA CGGGCGCGGG CTTCGCGCTC
ACGTATGTGC CGCTGTTCCT GACGGTCGCG GTGACGCTGC TGCTCGGCGG CCGTGCGGGC
TCGTCGTCGG TGCTGGTGCT CGCGCTGATC GTGATCGAGC AGACCGCGCA GGGCGACGGC
CCGTTCGCGT CGCTCCACGA GCATTACGGC AGTGCGCTGC TCGAAGCGCA GCTCTATCTG
GCGGTCGCGT CGCTGCTGGT GCTGACGGTG AGCACGCTGA AGACGACGCG CGAGCGCGTG
CACGAGCATG CCGCGGTGCT GCAGAACAAC ATGGAGCTCG CGCTCGCGAG CGCCGGCCAG
ATCGCGTACG TGCTCGATCC CGAGTCGGGC CGGATCGAAT GGAGCGGCGA CGTCGAGCGC
GTGTTCGGCG TCGGCGTCGA CGCCGCGCAG ATCGCGAGCG TGCCGCTCGT GCTCGAACGC
GTGCAGCCGG GCGACCGCGA CGCGTTGCGC GACTACTGGA ATGCGGAGAT CGCGGGCGAG
GACCGCGCGT CGCTGTCGCT GCGCATCGTG CTGCGCGACG GCGGCACGCG GACGATCACC
GACCACGGCG CGCCGTTGCT CGATTCGAAC GTCGACGTGA CGGTGGTGGC GGGCGTGTGG
CAGCTCGAAC GCGTGTGGCC GGCGGACGAA TGA
 
Protein sequence
MDTKRSRPGL VAALLWAALY LATGYISHEF NGPVRLTGYI WLPAGVTVGA FMLRPMREWL 
TLAGAFLVGQ LALSAIEHGS LVNAVLFTVD EVGAAALAVW LVQRVRFSLE GLYFLRSVIL
AGLIAGVVGA IGGAAWYTTL KGAPFFDVWS VWAASDFVGV LLVTPVLASW SRFRAHRSGD
HERFDLVLGI VAFALLAVVA LVIFDGDTSR KFGTGAGFAL TYVPLFLTVA VTLLLGGRAG
SSSVLVLALI VIEQTAQGDG PFASLHEHYG SALLEAQLYL AVASLLVLTV STLKTTRERV
HEHAAVLQNN MELALASAGQ IAYVLDPESG RIEWSGDVER VFGVGVDAAQ IASVPLVLER
VQPGDRDALR DYWNAEIAGE DRASLSLRIV LRDGGTRTIT DHGAPLLDSN VDVTVVAGVW
QLERVWPADE