| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4373 |
|---|
| Symbol | pdxA |
|---|
| ID | 6127200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1343908 |
|---|
| End bp | 1344963 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641651475 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001778008 |
|---|
| Protein GI | 170736748 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCC CCTCGACCGC CGCCGCCCTG CCCGTCGTCG CGCTGACGCT CGGCGACCCC
GCCGGTATCG GCGCCGAACT GATCGCGAAA CTGCTCGCCC GCCCCGACGC GACCGCCCGC
GCGAACCTCG TGCTGATCGG CGATCGCTGG CTGTGGGAGG CCGGTCAGCG TGTCGCCGGC
GTCAAGGTCG ACGTCGAACC CGTCGCGTCG CTGGCCGCCG CGCGCGACCG GCCGTCGGCC
GCGCGCGCCG CGTTCGTCGC CGTCGACACG GTTGATCCCG CGCAGGTCAC GGTCGGCCAG
GCGAGCGCCG CCGGCGGCCG CTCGACGCTC GCCGTGCTCG ACCGCTGCCT CGACGCCGCA
CTGGCCGGCG ACATCGACGC GATCTGCTTC GCGCCGCTGA ACAAGTACGC GATGAAACTC
GGCGGGCTGC GCCACGACGA CGAGCTGCAC CACTTCGCCG AGGCGCTCGG CGTGACCGGC
TACTTCTGCG AATTCAACAC GCTCGGCGAG CTGTGGACCG CGCGGATCTC GTCGCATATT
CCGCTGAAGG ACGCGGCGGC CCAGTTGAGC ATCGAGCGGA TCGAGCAGGC GTCCGAGCTG
ATCTACCGGT CGCTGCTCGC GAACGGCGTC GCCGCGCCGA AGGTCGCGAT CGCCGCGTTC
AACCCGCACG GCGGCGACGG CGGCAGTTGC GGCCGCGAGG AAGTCGACAT CATCGAGCCG
GCCGTGCGCC GCTTGCAGGC GCGCGACTGG CCGACCGACG CGCCGTTCCA CGGCCCGTTC
CCGGCCGACA CGATCTTCCT GAAGGCGCAG GCCGGCGACT ACCAGGCGAT CGTCACGATG
TATCACGACC AGGGGCAGAT CGCGATCAAG CTGCTCGGCT TCTCGCGCGG CGTGACCGTG
CAGGGCGGGC TGCCCGTACC GATCACGACG CCCGCGCACG GCACCGCATA CGACATCGCG
GGCCGCGGCA CGGCCGACGT CGGCGCGACC TGGCAGGCGC TGCAGATTGC GTGCCGAATG
GGCGCCGCGC GGCGTTCGCC GATCGTTTCA GCGTGA
|
|---|
| Protein sequence | MPTPSTAAAL PVVALTLGDP AGIGAELIAK LLARPDATAR ANLVLIGDRW LWEAGQRVAG
VKVDVEPVAS LAAARDRPSA ARAAFVAVDT VDPAQVTVGQ ASAAGGRSTL AVLDRCLDAA
LAGDIDAICF APLNKYAMKL GGLRHDDELH HFAEALGVTG YFCEFNTLGE LWTARISSHI
PLKDAAAQLS IERIEQASEL IYRSLLANGV AAPKVAIAAF NPHGGDGGSC GREEVDIIEP
AVRRLQARDW PTDAPFHGPF PADTIFLKAQ AGDYQAIVTM YHDQGQIAIK LLGFSRGVTV
QGGLPVPITT PAHGTAYDIA GRGTADVGAT WQALQIACRM GAARRSPIVS A
|
|---|
| |