Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4288 |
Symbol | |
ID | 6127116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1242466 |
End bp | 1243869 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641651391 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001777924 |
Protein GI | 170736664 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.22095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.428638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTGG CCTCGGCCGC GCTGGCCGCG TGTTCGGTCG GCGAGCCGTA CCGGCCGCCG GTGTCCGACG CAACGCGCAC CGGGCCGTTC GACGCGGTGG CCGACGTGCC GGCCGCGGCG GCCGGCGAAC CGCCGCAACG CTGGTGGCGC CTCTACGACG ATCCCGTGCT CGACGGTCTC GTGCGCGATG CGCTCGCGCA GAACCGCGAT CTCGCGGCGG CCGTCGCGCG GGTCGAGCGT GCGCGCGCCG TGTTCGACGA GGCCGGCGCC GCGCGGCTGC CCGACACGAC GGCCGGCTTC GGCGTCGACT ACGGCAAGCA CGCGCCCGAC CAGATCGTCG CGGCGGCCAA GGACACCGAT GCGCGGACGC GCTGGGGTTT CGCGCCGTCG TTCTCGCTGT CGTGGGAAGT CGATCTGTGG GGCCGCGTGC GCCATCTGGT CGACGCCGCG CAGGCCGACG CCGACGCGGT GCAGGCCGCG TCCGATGCGA TGCGCGTCGT GGTGGCCGCC GAGACGACGG CCGCGTATGC GCAGGTGTGC GCGTATGGCG AGCGGATCGA CGTGGCCGAG CAGTCGGTCG GCATCGCGGA CCGGCTGGCC GCGCTGACGG CGAAGCAGCG CGCGCACGGT CTCGTGTCCG ACCTCGAAGT GGCGCGCTCG CGCGCGTTCG CCGACGACAC GCGCGCCGAT TTGCCGGCGC TCGTCGGCTC ACGGCGCGCG GCGCTGTACG AACTCGCGGT GCTGACCGGG CGCGCGCCCG GCGCGCTGCC CGACGCCGCC GCGCATTGCC GCACCGCGCC CGTGCTGGCG CGGCCGTTCC CGGTCGGCGA CGGCGCGTCG CTGCTGCGCC GCCGCCCCGA CCTGCGCGAG AGCGAGCGCC AGCTGGCCGC CGCGAATGCG CGGATCGGCG TGGCGACGGC CGAGCTGTAT CCGTCGATTT CGCTCGGCGG CTCGGTGAAC TGGCTGTCGA CCGGCGGCGA TCCGTCGACG CTCGGCGACA AGTACGCGAT CGCCTGGGGC GTCGGCCCGC TGATCACGTG GCGCTTTCCG AACATGGCGG CGAGCCGCGC GCGGCTTGCG CAGGCCCGCG CCGACGACAC GCTCGCCCGT GCGCAATTCG ATGCGCAGGT GCTGCGCGCG CTGAAGGAAA CCGAGCAGGC GCTGGCCCGC TACGGCGCCG CGTGGCGCCG CCGCGCCGCG CTCGAAACCG CCCGCGCCGA GCATGCGCGC GCCTATCGCC TCGCCGAGCT GAACTACGAA GCCGGCGCCC TCGATTTCCT CGGCGTGCTC GACGCACAGC GCAGCCTCGT CGCGGTCGAT TCGGCGCTGG CCGAGTCGAC GCAGCAGGTC TCGCTCGACC AGGTCGCCGT GTTCAAGGCG CTCGGAGGCG GCTGGCAACC GTAG
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Protein sequence | MLLASAALAA CSVGEPYRPP VSDATRTGPF DAVADVPAAA AGEPPQRWWR LYDDPVLDGL VRDALAQNRD LAAAVARVER ARAVFDEAGA ARLPDTTAGF GVDYGKHAPD QIVAAAKDTD ARTRWGFAPS FSLSWEVDLW GRVRHLVDAA QADADAVQAA SDAMRVVVAA ETTAAYAQVC AYGERIDVAE QSVGIADRLA ALTAKQRAHG LVSDLEVARS RAFADDTRAD LPALVGSRRA ALYELAVLTG RAPGALPDAA AHCRTAPVLA RPFPVGDGAS LLRRRPDLRE SERQLAAANA RIGVATAELY PSISLGGSVN WLSTGGDPST LGDKYAIAWG VGPLITWRFP NMAASRARLA QARADDTLAR AQFDAQVLRA LKETEQALAR YGAAWRRRAA LETARAEHAR AYRLAELNYE AGALDFLGVL DAQRSLVAVD SALAESTQQV SLDQVAVFKA LGGGWQP
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