| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4257 |
|---|
| Symbol | |
|---|
| ID | 6127087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1212897 |
|---|
| End bp | 1213319 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641651362 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001777895 |
|---|
| Protein GI | 170736635 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.599841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000155832 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGTGA TCATCGACAG CTGCGTGTGG GTCGGGCTCG CCGGCGGAAT GGTCGCGCCG
CTCGCGGTGA TCGAGGCAGC CGGCGATGCG CCGGTGTTTA TCTCGACGAT CTCGCTCGGC
GAACTGGCGT TCGGCGTGCA CTCCTGCGCG GATGCGGCCG AGCGCGCGCG CCGCGCCGCG
CACCTGCGTC AGCTCGAGCG CCGGCCTGTG CTGGACATCA CGCGCCACAC CGCGGCCGCG
TTCGGCGTGC TGGCCGCCGC CGTCAAGCAA ACCGGTCGCT CGCCGCGGCC CCGCTACAAC
GACCTGTGGA TTGCCGCGCA GGCGATTGAA CACGGCTACG CACTGATGAC GCTGAACGTG
GCGGATTTTG CGGACCTACC GGGACTGAGC GTGATAGTGC CGACGAGCGC CGGCACCAGT
TGA
|
|---|
| Protein sequence | MGVIIDSCVW VGLAGGMVAP LAVIEAAGDA PVFISTISLG ELAFGVHSCA DAAERARRAA
HLRQLERRPV LDITRHTAAA FGVLAAAVKQ TGRSPRPRYN DLWIAAQAIE HGYALMTLNV
ADFADLPGLS VIVPTSAGTS
|
|---|
| |