Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4219 |
Symbol | |
ID | 6127050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1153048 |
End bp | 1153686 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641651325 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001777858 |
Protein GI | 170736598 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.186755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.698621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGA CACAAGCGAT GCCGCCCGAC AGGCCGATCG TCGCGATCGT CGACGACGAC GAACCCGTGC GCGACGGCCT CGCGCTGCTG CTGCGCACGG TCGGGCTGCC GACGCGTTGT TATGCGGATG CCCAGGCGTT TCTCGCCGAC GCCGACGACC GCGCGCTCGG CTGCGTGCTG CTCGACCTGC GCATGCCGGG CATGAGCGGC CTCGACGCGC TCGACCGGTT GAGCGCGCGG CGCGCACTGC CGGTGATCGT GCTGACGGGC CACGGCAACG TCGATGCGTG CCGGCGCGCG TTCAAGCGCG GCGCGCTCGA TTTCCTGCGC AAGCCGGTGG ACGACGACGA GCTGATCGAC ACGGTGCAGC AGGCGCTGCG GCGGCAGGCG GCGCAACGCG GGCAGGACGA CGCCGGCCAG ACGCGCGCGG CCCGCGTCGC GACGCTGAGT GCACGCGAAC GCGAAGTGCT GGAAGGGATC GTGCGCGGCT GGAGCAACAA GGAGATCGCG CGTGCGCTCG GGCTGTCGCC GCGCACAGTC GAGACCTATC GCGCGAACGT GTTCGACAAG CTGCAGGCCG CGTCGCTCGT CGAGCTTGTT CGCGATTACG CGGCGCTCGC GGGCACGGCG CTGTCGTAG
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Protein sequence | MSGTQAMPPD RPIVAIVDDD EPVRDGLALL LRTVGLPTRC YADAQAFLAD ADDRALGCVL LDLRMPGMSG LDALDRLSAR RALPVIVLTG HGNVDACRRA FKRGALDFLR KPVDDDELID TVQQALRRQA AQRGQDDAGQ TRAARVATLS AREREVLEGI VRGWSNKEIA RALGLSPRTV ETYRANVFDK LQAASLVELV RDYAALAGTA LS
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