Gene Bcenmc03_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4219 
Symbol 
ID6127050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1153048 
End bp1153686 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID641651325 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001777858 
Protein GI170736598 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.186755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.698621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA CACAAGCGAT GCCGCCCGAC AGGCCGATCG TCGCGATCGT CGACGACGAC 
GAACCCGTGC GCGACGGCCT CGCGCTGCTG CTGCGCACGG TCGGGCTGCC GACGCGTTGT
TATGCGGATG CCCAGGCGTT TCTCGCCGAC GCCGACGACC GCGCGCTCGG CTGCGTGCTG
CTCGACCTGC GCATGCCGGG CATGAGCGGC CTCGACGCGC TCGACCGGTT GAGCGCGCGG
CGCGCACTGC CGGTGATCGT GCTGACGGGC CACGGCAACG TCGATGCGTG CCGGCGCGCG
TTCAAGCGCG GCGCGCTCGA TTTCCTGCGC AAGCCGGTGG ACGACGACGA GCTGATCGAC
ACGGTGCAGC AGGCGCTGCG GCGGCAGGCG GCGCAACGCG GGCAGGACGA CGCCGGCCAG
ACGCGCGCGG CCCGCGTCGC GACGCTGAGT GCACGCGAAC GCGAAGTGCT GGAAGGGATC
GTGCGCGGCT GGAGCAACAA GGAGATCGCG CGTGCGCTCG GGCTGTCGCC GCGCACAGTC
GAGACCTATC GCGCGAACGT GTTCGACAAG CTGCAGGCCG CGTCGCTCGT CGAGCTTGTT
CGCGATTACG CGGCGCTCGC GGGCACGGCG CTGTCGTAG
 
Protein sequence
MSGTQAMPPD RPIVAIVDDD EPVRDGLALL LRTVGLPTRC YADAQAFLAD ADDRALGCVL 
LDLRMPGMSG LDALDRLSAR RALPVIVLTG HGNVDACRRA FKRGALDFLR KPVDDDELID
TVQQALRRQA AQRGQDDAGQ TRAARVATLS AREREVLEGI VRGWSNKEIA RALGLSPRTV
ETYRANVFDK LQAASLVELV RDYAALAGTA LS