Gene Bcenmc03_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4060 
Symbol 
ID6126893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp998225 
End bp998857 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID641651168 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001777701 
Protein GI170736441 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC ACGCCTTCTT CTCGGCCAAC CTGCTGCTCG CCTACACGGC CTATTTCATC 
GGCACGGCCA GCCCCGGGCC GAGCAATCTC GCGATCATGT CGGTCGCCGC GAACCAGGGC
CGCAAGGCGG CGCTCGCGTT CGCGCTCGGC GTGATTTCAG GGTCGATGTG CTGGGCGACG
GTGGCGGCGC TCGGTATCTC GGCCGCGCTG CTCGCGTGGT CGAAGCTGCT GGTCGCGATC
AAGGTGTTCG GCGGGCTGTA CCTGCTGTGG CTCGCGTTCA AGTCGGGCCG CACGGCGCTG
GCGGGGCCGC CGGCGGCAGC GGCGAACGCG GCGCGCGAGC AGCGGCTGTC GCGCTTCTAC
GTGCGCGGCG CGATGCTGCA CCTGACCAAT CCGAAGGCGA TTCTCGTGTG GGTGTCGATC
GTCGCGCTGT CGTCGAACGG CGCGGGCGGC GCGCATGGCG CGGTCGTGCC GGGCTGCCTG
GCGATCGGCT GCCTGGTGTT CGGCGGCTAT GCGCTGGTGT TCTCGATGGA CGGGGCGCGC
CGGCTGTACG TGCGCGGGCG GCGTGCGATG GAAGCCTGCC TGGCCGTCGT GTTCGGCGTG
GCGGGCGTTC GGCTGCTGGT GACGAACGTC TAG
 
Protein sequence
MNVHAFFSAN LLLAYTAYFI GTASPGPSNL AIMSVAANQG RKAALAFALG VISGSMCWAT 
VAALGISAAL LAWSKLLVAI KVFGGLYLLW LAFKSGRTAL AGPPAAAANA AREQRLSRFY
VRGAMLHLTN PKAILVWVSI VALSSNGAGG AHGAVVPGCL AIGCLVFGGY ALVFSMDGAR
RLYVRGRRAM EACLAVVFGV AGVRLLVTNV