| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3993 |
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| Symbol | |
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| ID | 6126826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 928120 |
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| End bp | 929247 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641651101 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001777634 |
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| Protein GI | 170736374 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.717934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.104831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCT TCAGCTTGCC GGACCCGACT TCGCACGCGA TCACGATTCG CGCGAAGGCA
CTGACGTTCG ACGATCTCAA ATCGCGGGTG CTGCTCGAAC GCATCCAGCT CGTCGCACCG
AGCGATGCGA CGGTGCTCGT CACCGGCGAG AGCGGCACGG GCAAGGAGCT GATCGCACGC
CTCGTGCATT CGCTGAGCGA GCGCCACGAC GGGCCGTTCG TCGCGGTCAA CTGCGGGGCT
TTTTCGGAAA CGCTGATCGA AAGCGAGCTG TTCGGCCACG AGCGCGGCGC GTTCACCGGC
GCGATCAACA GCCAGCCCGG CTGGTTCGAA TCCGCGAATC GCGGCACGCT GTTTCTCGAT
GAAGTGGGCG ACCTGCCGCT GTCCGCGCAG GTCAAGCTGC TGCGTGTGCT GCAGGAGCGC
GAGGTGACGC CGGTCGGCTC GCGCAAGACC GTGAAGATCG ACGTGCGGCT CGTCGCGGCG
ACCAACGTGA ATCTCGAAGC CGCGGTGCGC GCGGGCAATT TCCGCGAGGA TCTGTACTAC
CGGCTCAACG TCGTGAAGCT GAGCCTGTTG CCGCTGCGCG AGCGGCCCGG CGACATCGCG
CCGCTGATCG AACACTTCAT CGACACCTAC GCGAAGCGGC TGCGCGTGGC CGCGCCGACG
CTGACCGACG CCGCTCGCAC TCGGCTGCAT GCGCATGCAT GGCCCGGCAA CATCCGCGAA
CTGGAGAACG TGATTCACCA CGCGGTGCTG ATCTGCGCAG GCGGCGCGAT CGACGTCGGC
GACCTGCAAT TCTCCGCGCT GTCACTTGCG CCCGATCCGG CCGACGCACC AGGCGCGGCC
GCCACGCCGC CGCGCCGCGC GCGCGACGTG GCCGAAGCGA CCGACGCACT GCGCCACGCG
GTGATCGAAC TGCTGGATCT CGGCACGCCG GCGCTGTGGC AGCACATCGA GGACACCGTG
TACCGCAGCG TGTTCGACTA CAGCGAGCAC AACCAGCTGC GGATGTCGCG CCTGCTCGAC
CAGTCGCGCA ACATCGTGCG TGCCCGGCTC GCGCAGATCG GCATCCTGAA GCCGCGCGAC
GCGGGCGACG GCGGCGACGC CGACGCGCGG CTGCGCCGTC AGGCGTGA
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| Protein sequence | MAIFSLPDPT SHAITIRAKA LTFDDLKSRV LLERIQLVAP SDATVLVTGE SGTGKELIAR
LVHSLSERHD GPFVAVNCGA FSETLIESEL FGHERGAFTG AINSQPGWFE SANRGTLFLD
EVGDLPLSAQ VKLLRVLQER EVTPVGSRKT VKIDVRLVAA TNVNLEAAVR AGNFREDLYY
RLNVVKLSLL PLRERPGDIA PLIEHFIDTY AKRLRVAAPT LTDAARTRLH AHAWPGNIRE
LENVIHHAVL ICAGGAIDVG DLQFSALSLA PDPADAPGAA ATPPRRARDV AEATDALRHA
VIELLDLGTP ALWQHIEDTV YRSVFDYSEH NQLRMSRLLD QSRNIVRARL AQIGILKPRD
AGDGGDADAR LRRQA
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