Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3992 |
Symbol | |
ID | 6126825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 927341 |
End bp | 928129 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641651100 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001777633 |
Protein GI | 170736373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.955466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0573169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCG TTACCCGCGT TGCCTCGCTC GCCCCGCTGC GCCGCCGCGC GCGCGGCCTC GTCGTACCGG CGCTGCTGCT GGCCGCCTGG CAAACCGCCT CGTCCGGCGA CGCGGCCCAT CAATATGCGT TCGTGCCGCT GCAGCAGGTC GGCGCCACGC TCGTCGAACT TGCACGCAGC GGCGAACTTG CGACCGATCT CGGCGCGAGC CTGCGCCGCA CGACGCTCGG GCTCGGCTTC GGCGTCGCGT TCGGGCTCGT GTTCGGCGCG GCGATGGCGC GCTCGACGCT CGCACGCAAG CTCGGCGAAC CGGCGTTCCA GGCGCTGCGC TACGTACCGC TGCTCGGGCT GATTCCGCTG CTGAGCCTGT GGGCCGGCAC CGGCGAATTC GCGAAGGTGT TCATCATCGC GCTGGCCGCG CTCTACCCGA TGACCACCGC CAGCTTCGAC GGGTTGCGCC GCGTCGATCC GCGCTACGTC GAACTCGCGC AGTCGTATCG CCTGACCCGC ATCGGCCTGT GGCGCGACGT GCTGATCCCC GGCGCGTTGC CCGACCTGTT CGCGGGCGTG CTGCAGGCCG TGCCGTTCGC GTGGATCACC GCGACCAGCA GCGAGCTGCT GTTCAATACG GGCGCCGGCG TCGGCAGCCT GATGCAGAAC GCGCAGGCCG GCGCGCGCGC CGACGTGCTG CTGGTGTGCG TGCTGGGTGT GACGGCGCTG GCCGTCGGCA TGAGCTCGTT ATGCGAGCGG ATCGCGCAGC GCGCGCTGCG CTGGCGCGAT CACGCCTGA
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Protein sequence | MTFVTRVASL APLRRRARGL VVPALLLAAW QTASSGDAAH QYAFVPLQQV GATLVELARS GELATDLGAS LRRTTLGLGF GVAFGLVFGA AMARSTLARK LGEPAFQALR YVPLLGLIPL LSLWAGTGEF AKVFIIALAA LYPMTTASFD GLRRVDPRYV ELAQSYRLTR IGLWRDVLIP GALPDLFAGV LQAVPFAWIT ATSSELLFNT GAGVGSLMQN AQAGARADVL LVCVLGVTAL AVGMSSLCER IAQRALRWRD HA
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