Gene Bcenmc03_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3992 
Symbol 
ID6126825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp927341 
End bp928129 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID641651100 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001777633 
Protein GI170736373 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.955466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0573169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG TTACCCGCGT TGCCTCGCTC GCCCCGCTGC GCCGCCGCGC GCGCGGCCTC 
GTCGTACCGG CGCTGCTGCT GGCCGCCTGG CAAACCGCCT CGTCCGGCGA CGCGGCCCAT
CAATATGCGT TCGTGCCGCT GCAGCAGGTC GGCGCCACGC TCGTCGAACT TGCACGCAGC
GGCGAACTTG CGACCGATCT CGGCGCGAGC CTGCGCCGCA CGACGCTCGG GCTCGGCTTC
GGCGTCGCGT TCGGGCTCGT GTTCGGCGCG GCGATGGCGC GCTCGACGCT CGCACGCAAG
CTCGGCGAAC CGGCGTTCCA GGCGCTGCGC TACGTACCGC TGCTCGGGCT GATTCCGCTG
CTGAGCCTGT GGGCCGGCAC CGGCGAATTC GCGAAGGTGT TCATCATCGC GCTGGCCGCG
CTCTACCCGA TGACCACCGC CAGCTTCGAC GGGTTGCGCC GCGTCGATCC GCGCTACGTC
GAACTCGCGC AGTCGTATCG CCTGACCCGC ATCGGCCTGT GGCGCGACGT GCTGATCCCC
GGCGCGTTGC CCGACCTGTT CGCGGGCGTG CTGCAGGCCG TGCCGTTCGC GTGGATCACC
GCGACCAGCA GCGAGCTGCT GTTCAATACG GGCGCCGGCG TCGGCAGCCT GATGCAGAAC
GCGCAGGCCG GCGCGCGCGC CGACGTGCTG CTGGTGTGCG TGCTGGGTGT GACGGCGCTG
GCCGTCGGCA TGAGCTCGTT ATGCGAGCGG ATCGCGCAGC GCGCGCTGCG CTGGCGCGAT
CACGCCTGA
 
Protein sequence
MTFVTRVASL APLRRRARGL VVPALLLAAW QTASSGDAAH QYAFVPLQQV GATLVELARS 
GELATDLGAS LRRTTLGLGF GVAFGLVFGA AMARSTLARK LGEPAFQALR YVPLLGLIPL
LSLWAGTGEF AKVFIIALAA LYPMTTASFD GLRRVDPRYV ELAQSYRLTR IGLWRDVLIP
GALPDLFAGV LQAVPFAWIT ATSSELLFNT GAGVGSLMQN AQAGARADVL LVCVLGVTAL
AVGMSSLCER IAQRALRWRD HA