Gene Bcenmc03_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3908 
Symbol 
ID6126741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp834233 
End bp835357 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID641651016 
Productamidase 
Protein accessionYP_001777549 
Protein GI170736289 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCT TCATCGACAC CTTCACGCTC GGCGGCCCCG GCCCGACGAT CGCGATCAAG 
GACACGATCG ACATCGCGGG TCACCCGACC CGCGCGGCGA GCCGCGCGCT CGCCGATGCG
CCGCCCGCCG AACAACACGC GGACGTGGTC CGCCTGCTGC TCGACGCCGG CTGGCAGATC
GCCGGCAAGG CGAACATGCA CGAACTCGCG TTCGGCATGA CCGGCATCAA CGACTACACG
GGCACGCCCG TCAATCCGCA AGATGCCGCG CGCATTCCCG GCGGCTCGTC GAGCGGCTCC
GCATCGCTCG TCGGGCTCGG CACCGTCGAC GCGGCGCTCG GCACCGATAC CGGCGGCTCG
ATTCGCGGGC CGGCCGCTTG CTGCGGCGTG GTGGGCCTCA AGCCGACGTT CGGCCGCGTG
TCGCGGCGCG GCGTCGCGCC CGCCGATACC ACGCTCGATT GCGTCGGGCC GTTCGCCCGC
GAAATCCGTA CGCTCGTCGC GGTGATGGCC GCAATCGCGC CGGGCTTCGA CCGTGCGCGG
GCGGCGGCTT CCGCGGCAGG CTGCACGGTT GCGCAACTCG CCGTCGAAGC CGATCCGGCG
ATCGCCGCCG CGCTCGATGC GGCCGTTCGC GCATCGGGCC TGCGTTCGCA CACGGTCGTG
CTCGACGCCA TGCCGGCCGC GTTCGCGGCG GGGCTCACCG TGATCAACGC GGAAACGTCG
CGCGCGTTCG GTCATCTGGT CGCGACCGGC AAGCTCGGCG CCGACCTCGA TGCGCGATTG
CGTGCGGCCG CAACGACCGC GCCTGCGGCA TTGAAGGAAG CCGAAGCCGT GCGCGCACGC
TTCACCGCGC AGGTCGATGC CGCGCTCGAA CACGCGGACG TGCTGGTACT GCCGACGCTG
CCCTCGTTGC CGATCACGCT GCAGCAGGCA CGCGACGGCG TATCGGTGAT CGCGATGTCG
TCGCTGATCC GGCCGTTCAA CCTGAGCGGC CATCCGGCGC TCAGCCTGCC GCTGCCGCTC
GCCGGTTCGC CGTTGAAGGC CGGCTTGCAG ATCGTCGGAC GCAAGGGCGC GGACGAACAG
GTCTGCGCGA TCGCGGCACA CTTCGAGGCG GCACTCGCCG CATGA
 
Protein sequence
MTGFIDTFTL GGPGPTIAIK DTIDIAGHPT RAASRALADA PPAEQHADVV RLLLDAGWQI 
AGKANMHELA FGMTGINDYT GTPVNPQDAA RIPGGSSSGS ASLVGLGTVD AALGTDTGGS
IRGPAACCGV VGLKPTFGRV SRRGVAPADT TLDCVGPFAR EIRTLVAVMA AIAPGFDRAR
AAASAAGCTV AQLAVEADPA IAAALDAAVR ASGLRSHTVV LDAMPAAFAA GLTVINAETS
RAFGHLVATG KLGADLDARL RAAATTAPAA LKEAEAVRAR FTAQVDAALE HADVLVLPTL
PSLPITLQQA RDGVSVIAMS SLIRPFNLSG HPALSLPLPL AGSPLKAGLQ IVGRKGADEQ
VCAIAAHFEA ALAA