Gene Bcenmc03_3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3817 
Symbol 
ID6126650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp733465 
End bp734091 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID641650924 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001777458 
Protein GI170736198 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0893485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TGACCACGCT GACCACCTTC ACGGCCGTCG TTCTGGGCCT GTTCCTGATC 
CCCGGCCCCG CCGTGCTGCT CGTGCTGAGC CGCACCGTGC AGGGCGGCCG CAAGACCGGC
ATCCTGACCG GCCTCGGCGT CGCGAGCGGC GACTTCGTGC ATACGCTGTT CGCGGCCGTC
GGTCTGTCGG CGCTGCTGAT GACGTCGGCA CTCGCGTTCA ACGTCGTGAA GCTGGTCGGC
GCCGCGTACC TGATCTATCT CGGCGTGCGG GCGCTGCTCG AGAAACCGTC CGATCCGTCG
CTGCCCCAGG TGTCGCCCGT CACGCCGCTC AAGGCGTACC TGCAGGCGAT TCCCGCCGAA
GTGCTGAATC CGAAGACCGC ACTGTTCTTT CTCGCGTTCA TGCCGCAGTT CGTGCATCCG
GAACGCCGCT CGACGTTCGT GCAGTTCGCG GTGCTCGGGC TGATCTTCGT CGTGCTCAGC
TCGCTCTACA CGACGCTGAT CGCATGCTCG ATCCGCCCGC TCGGCCGCAT CGTGAAGCGG
CTCACGTGGC TCACACGCTG GCAGGGCAAG ATCATCGGCT CGATCTTCAT CGCGCTGGGG
CTGCGGGTAG CCGTGCAGCA GCGCTGA
 
Protein sequence
MFDLTTLTTF TAVVLGLFLI PGPAVLLVLS RTVQGGRKTG ILTGLGVASG DFVHTLFAAV 
GLSALLMTSA LAFNVVKLVG AAYLIYLGVR ALLEKPSDPS LPQVSPVTPL KAYLQAIPAE
VLNPKTALFF LAFMPQFVHP ERRSTFVQFA VLGLIFVVLS SLYTTLIACS IRPLGRIVKR
LTWLTRWQGK IIGSIFIALG LRVAVQQR