Gene Bcenmc03_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3793 
Symbol 
ID6126626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp708656 
End bp709090 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID641650900 
Productcupin 2 domain-containing protein 
Protein accessionYP_001777434 
Protein GI170736174 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.742443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0537176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGACCACCAC CGCTTTTTCC CATGTGAAGC CGCAGGACAC CGTCTTTCAA 
GGCGAGGGCC TGCGCGACTT CTTCCTGTAC CGCGATCTCG GTATCGCGGC CGCGACGAAC
GGCAAGGTCG TCGCGCAACT CGTCAGGGCG AATCATGCAC CGGAGGCGGG CACCGGCTGG
CACCGTCACG AGGCCGAGTT CCATATCGTG ATCATGCTGA AAGGCTGGGC GCGCTTCATG
TACGGCGAAC AGGAAACGCT GGTGGCGGCC GGCGACTGCG TGCACCAGGC GCCGGGGATC
GTCCACTACC TGTTCGACTA CTCGCCGGAT ATGGAATACC TGGAGATCGT CGGGCCTGCC
GACTTCAAAT CGATCGACGT CGACGGCCCG TGCGCTGTGC CGGAGCCGAC GCCGTGGGGC
GAAGCTGGTG CGTAG
 
Protein sequence
MSTPTTTAFS HVKPQDTVFQ GEGLRDFFLY RDLGIAAATN GKVVAQLVRA NHAPEAGTGW 
HRHEAEFHIV IMLKGWARFM YGEQETLVAA GDCVHQAPGI VHYLFDYSPD MEYLEIVGPA
DFKSIDVDGP CAVPEPTPWG EAGA