Gene Bcenmc03_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3703 
Symbol 
ID6126537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp607962 
End bp609374 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID641650811 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001777345 
Protein GI170736085 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.757511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA CTATCATCGG CAGCGGTTAC GTAGGGCTCG TCACCGGCGC CTGTCTCGCC 
GACATCGGGC ACGACGTGTT CTGTCTCGAC GTCGACCAGG CAAAGATCGA CATCCTGAAC
AACGGCGGCG TGCCGATCCA CGAGCCGGGC CTGAAGGAAG TCATCGCGCG CAACCGCTCG
GCCGGCCGCC TGCGCTTCTC GACCGACATC GAGGCCGCGG TCGCGCACGG CGACGTGCAG
TTCATCGCGG TCGGCACGCC GCCCGACGAG GACGGCTCGG CCGATCTGCA ATACGTGCTC
GCGGCGGCGC GCAACATCGG CCGCTACATG ACCGGCTTCA AGGTGATCGT CGACAAGTCG
ACGGTGCCGG TCGGCACGGC CGAGCGCGTG CGCGCGGCGG TCGCCGAGGA GCTCGCGAAG
CGCGGCGGCG ACCAGATGTT CTCGGTCGTG TCGAATCCGG AATTCCTGAA GGAAGGCGCG
GCCGTCGACG ATTTCACGCG GCCGGACCGC ATCGTGATCG GCTGCGACGA CGACGTGCCG
GGCGAGCGCG CCCGCGAGCT GATGAAGAAG CTCTACGCGC CGTTCAACCG CAATCACGAG
CGCACGCTGT ACATGGACGT GCGCTCGGCC GAGTTCACGA AATACGCGGC GAACGCGATG
CTCGCGACGC GTATCTCGTT CATGAACGAG CTGGCGAACC TCGCCGACCG CTTCGGCGCC
GACATCGAGG CCGTGCGCCG CGGGATCGGC TCCGATCCGC GCATCGGCTA TCACTTCCTG
TACGCCGGCT GCGGCTACGG CGGCTCGTGC TTCCCGAAGG ACGTCGAGGC GTTGATCCGC
ACGGCCGACG AGCACGGCCA GTCGCTGCAG ATCCTGAAGG CCGTGTCGTC GGTCAACGCG
ACGCAAAAGC GCGTGCTCGC CGAGAAGATC GTCGCGCGCT TCGGCGAGGA CCTGAGCGGC
CGCACGTTCG CGCTGTGGGG CTTGGCCTTC AAGCCGAACA CCGACGACAT GCGTGAAGCG
CCGAGCCGCG AGCTGATCGC CGAGCTGCTG TCGCGCGGCG CGCGCGTCGC CGCGTACGAC
CCGGTCGCGC AGCAGGAAGC GCGCCGCGTG ATCGCGCTCG ATCTCGCCGA TCACCCGAGC
TGGCTCGAAC GCCTCTCGTT CGTCGACGAC GAGGCGCAGG CCGCGCGCGA CGCCGATGCG
CTCGTGATCG TCACCGAATG GAAGGCGTTC AAGAGCCCGG ACTTCGTCGC GCTCGGCCGC
CTGTGGAAGA CGCCGGTGAT CTTCGACGGC CGCAACCTGT ACGAGCCGGA GACGATGAGC
GAGCAGGGCA TCGAGTACCA CCCGATCGGC CGGCCGGGCT CGCGCCAGGC GGTCGCCGCT
CGCGTGCCGG GCGCCGCGCG CGCCAGCGCG TAA
 
Protein sequence
MNLTIIGSGY VGLVTGACLA DIGHDVFCLD VDQAKIDILN NGGVPIHEPG LKEVIARNRS 
AGRLRFSTDI EAAVAHGDVQ FIAVGTPPDE DGSADLQYVL AAARNIGRYM TGFKVIVDKS
TVPVGTAERV RAAVAEELAK RGGDQMFSVV SNPEFLKEGA AVDDFTRPDR IVIGCDDDVP
GERARELMKK LYAPFNRNHE RTLYMDVRSA EFTKYAANAM LATRISFMNE LANLADRFGA
DIEAVRRGIG SDPRIGYHFL YAGCGYGGSC FPKDVEALIR TADEHGQSLQ ILKAVSSVNA
TQKRVLAEKI VARFGEDLSG RTFALWGLAF KPNTDDMREA PSRELIAELL SRGARVAAYD
PVAQQEARRV IALDLADHPS WLERLSFVDD EAQAARDADA LVIVTEWKAF KSPDFVALGR
LWKTPVIFDG RNLYEPETMS EQGIEYHPIG RPGSRQAVAA RVPGAARASA