Gene Bcenmc03_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3504 
Symbol 
ID6126339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp376387 
End bp377202 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID641650612 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001777147 
Protein GI170735887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.334186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000427033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGCACG CCGCCACACC GTCAGCCACA CCGCCCGCCA CCGCCGACCG CCGCCTGCAT 
GTACCCGACT GGCGCGGCTT CGTGCTGCCG CTCGCCGCAC TTGCGTGCTG GTGGGCCCTC
GCTTCCGCGC ACCTCATGAA AAGCGGGCTG TTCGTCAGCC CCGCCGACGT GCTGCACACC
GCGTGGGCGC AGGCCACGAG CGGCGCGCTC GGCCGTGCCT TGTCGGCATC GCTCGCGCGC
GAAGCGTGCG GGTTCGCGAT CGGCGCGACG GGCGGGCTGT TGCTCGGCGC CGTGCTCGGG
CTGTCGCGCG TCGCCGCGCG GATGGTCGGC CCGAGCTTCG ACACGTTCAA GCAGATCTCG
CTGTTCGCGT GGATTCCACT GATTTCCGTA TGGTTCGGGC TCGGCGACGT CGCGAAGGTC
GTGTTCCTGT CGCTCGCCGC GCTGCTGCCG GTCGCCGCCC ATACCTGCGA CGGCATTCAC
GCGGTGCCGC GCACGTACGT CGACGTCGCC CGCGCGCTGC GCTATTCGCG GCTCCAGTTG
ATCCGCTACG TGATCCTGCC GGCCGCGCTG CCGTCGATCT TCACCGGCCT GTATCTCGGC
CTGATCTATT CGTGGCTCGC GACGCTCGGC GCCGAATACC TGCTCGTCGC CGGCAGCGGG
ATCGGCAACA CGCTGATCGA CGGCAGCGAG CAGTTCCGGA TGGATCTCGT GCTGTTCGGG
ATCATCGTCG TCGGCGTGAC CGGCTGGGCA CTGAACGCGA CCGCGCGGGC GATCGAGCGC
AAGGTGCTGG CCCGGCGCGG CGACCTGACG CGCTGA
 
Protein sequence
MSHAATPSAT PPATADRRLH VPDWRGFVLP LAALACWWAL ASAHLMKSGL FVSPADVLHT 
AWAQATSGAL GRALSASLAR EACGFAIGAT GGLLLGAVLG LSRVAARMVG PSFDTFKQIS
LFAWIPLISV WFGLGDVAKV VFLSLAALLP VAAHTCDGIH AVPRTYVDVA RALRYSRLQL
IRYVILPAAL PSIFTGLYLG LIYSWLATLG AEYLLVAGSG IGNTLIDGSE QFRMDLVLFG
IIVVGVTGWA LNATARAIER KVLARRGDLT R