Gene Bcenmc03_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3403 
Symbol 
ID6126137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp258282 
End bp259427 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID641650512 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001777047 
Protein GI170735787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCGC ACTATGTCGA GCCGCTCAGC GGCACTACTT ATCCTCTCGA CACGCCCCGG 
TGGTGCTCGG ACGACCGCAG GCCGCTCCTG ATCTCGCCGC AGGCCGGCAT TTCCCGGGAC
GACATCGATC GACACCTTCG CTCCCAATGG CGCTATCGCG CATCGCTGCC CGTCGAGATC
GTCTCTCCCA TCTCCATGGG GGAAGGGTGC ACGCCGTTGG TCCAGAAGAC GTGGGGCGAC
CACCGGCCGT ATTTCAAGCT GGAGTGGTTC AGTCCCACGA GCAGCTTCAA GGATCGCGGC
ACGACGGTGA TGCTCTCGAT GCTGCGGCAG CAAGGCATCG CGTCCGTTCT GGAGGACAGT
TCGGGCAACG GCGGCGCGTC GGTGGCGGCT TATGGTGCTG CCGGCGCCAT GCGCGTGAAG
ATTCTGGCGC CCGCCTACGC ATCGCCCGCG AAGATTGCCC AGATGCGAGC CTACGGGGCG
GAGGTGCAAC TGGTCGACGG GCCTCGACAG GCGTGCGAGG ACGAGGCTGT CCGGCAGTCC
GCGAGCATCT TCTACGCCAG CCACAATTGG CAGCCCTTTT TCCTCGAAGG GACCAAGTCG
ATCGGCTACG AGATCTGGGA GGACCTCCAC TTCCGGGCGC CGGACAACAT CGTCATGCCG
GCGGGCGTGG GCAGCAATGT ACTCGGCTGT TATCTGGCGT TCTCGGAACT GATGCGCGCG
GGGCAGATTG ACAAAATGCC CAGGCTCTTC GTTTGCCAGC CATTGAACTG CTCGCCTATC
GATGCCAGCT TCCAGGCGGG CGTCACGACG CCCGTTGCGC GCGAGGTTCG AAAGACGGTC
TCCGAGGGGA CGGCCATCGC CCATCCTCTG CGCCTGGCGC AAGTGGTGAA CGCGGTCAGG
GAGACGGGCG GCACGACGGT GGCCGTGGAG GAAGCAGCAA TCGTCGACGC GCTCACGCGC
ATTGCGCGGC TGGGCCTTTT GCCGGAACTG ACTTCGGCGA CCGCGGTTGC AGGATTGGAT
CGGCTCACGC AACTGGGGGC GATTCAGGCG CGAGAGGAAA CGGTCGTCCT GCTGACGGGC
ACGGGTATCA AGAACGCCGA AGCCATCGCG GATATGTACT CGGACATTCC CGATACGCTT
GCCTAA
 
Protein sequence
MKPHYVEPLS GTTYPLDTPR WCSDDRRPLL ISPQAGISRD DIDRHLRSQW RYRASLPVEI 
VSPISMGEGC TPLVQKTWGD HRPYFKLEWF SPTSSFKDRG TTVMLSMLRQ QGIASVLEDS
SGNGGASVAA YGAAGAMRVK ILAPAYASPA KIAQMRAYGA EVQLVDGPRQ ACEDEAVRQS
ASIFYASHNW QPFFLEGTKS IGYEIWEDLH FRAPDNIVMP AGVGSNVLGC YLAFSELMRA
GQIDKMPRLF VCQPLNCSPI DASFQAGVTT PVAREVRKTV SEGTAIAHPL RLAQVVNAVR
ETGGTTVAVE EAAIVDALTR IARLGLLPEL TSATAVAGLD RLTQLGAIQA REETVVLLTG
TGIKNAEAIA DMYSDIPDTL A