| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3318 |
|---|
| Symbol | |
|---|
| ID | 6126053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 157755 |
|---|
| End bp | 159542 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641650428 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001776963 |
|---|
| Protein GI | 170735703 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0332966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCA TCCAGTTCGA TGGATGCGTC GGCTGGCTTC ACGAGGGCAC TCGACCACAC
GGCGTCGTCA TATGCGAGCC GCTCGGCCAT GAGGCGCTCT GGCTGCACAA GCTTGTTCGC
TCAATTGCGG AACACCTTGC CGACCGTGGT TTTCCGGTTC TACGTTTTCA CTATCCGGCG
AGTGGCGATT CGCTCGGCGA CGAACAGGAT CCCGAACGTT TCGAGAACAT GCTCGCAAGC
GTGCGCCATG CCGTCCGGAC CTTGCGCGAC AACGCCGTGC TGGATGGCCT GACGCTCATC
GGTGTACGCG CCGGTGCGCC ATTGGCGCTT CTCGCTTCGG ACGGCCTGTC CGGAATCACG
CGTTTCATCG CACTTGCCCC CGTCGTGCGT GGTCGCAGCT ACGTGCGCGA GCTCTCGCTC
GTCGCGCAAC GCTGGCTCGA TAACCTGCCG CCGACCGTGC GGGAGGCGGT TCGTGACGAA
CGGCCGTTCA AGGTGCTCGG CCACGCGTAT CCCGACGATC TCCTCGGAAC ACTCCGCAGT
ATCGACCTGT GCCAGGCTGC CGGCCAGCTG CGCGAGTTGC CCGCGCGCGC GCTGCTCGTC
GATACGCCGT ACGGCGATGG TCCGGCGTTG TCGGACACGC TGCGCGCGCG TGGCGTCGCG
GTCAGTATCC ACACATGTTC GGACTGGGCG GCCGCCATGT GCGAACCGCA CCGCTCCCGG
CTGCCGAATG CGTTGCTCGA CACGATCGGA AGCTGGATCG ACGACGATCC TGACGCGGAC
GTACGAACCT CCACGCGCCA GCACGTTTCC GACGTCGTCC TGGCCGGAAG CGGCAGTGTC
GAGCGCGTGA TTCGCATGGG GACGCAACCA CTGATCGGGG TGCTGTGCGA GCCAGCCGAC
GACGCCATGC GTCTCGCGGC CCCCACGCTG CTTATCGCCA ATACCGCCGC CAATCCGCGT
ACGGCCGACG GGCGGCTTGC AGTTCGCCTG GCGCGGTCGC TCGCCGCGCG CGGCATCCGC
AGTCTGCGCT TCGATTCGAG CGGGATCGGC GACAGCAGCC TGCGTGCGCG TGACGATCAA
TCGGATATTC CGTATTCGGA CCAGATGATC GACGACATGA TCTGCGCCGC GCGTTGGCTG
AAAGAGGCGG GTCACCATCG GATCGTCACG TTCGGAATCT GCTCCGGAGC GTACGCGTCG
CTTCATGCCG CCGAGCGGGG CGCGCTTGCC GGCGCGATCA CGATCAATCT CCCCGTGTTT
GTCTGGCCGC GCGGACAGAC ACTGGCGGAT GTCGTCGACA ACCAGACCAA TTCGATGCGT
GGTTATGTCG CTTCATTGCG CAGCCTCGGC AAGTGGCGCC GGGTGCTGCT CGAGGGGCGT
GATCCGCGTC CGGTGCTGCG TGCGCTGATT CGTTTCGTCG CCGACTTCAC GACGGTCCCG
ATCAAGAGCT TCATGGAGCG CATGGGGCGC GCGCCGGACA AGGATACGCC GCGCGGGATG
CTGCACGACA TGTCGGCACG CGGCATCCAG GCGCATCTCC TCTACGGCAC GTTCGATCCG
GGCGTCGATG TCGTGGTTCG GCATTTCGGT CCGGTGTCCG GTGCGTTCGC GCATTTGTCG
AACGTATCGG TCGATACGCA GGACGGGCTC GACCATTCGT TGCACAGCGA TGCCGCCGCG
CAGTACGTGG TCGACCGCTG CGCTGCGCTG CTTTCCGGCT GGCATGCGCC GGCGGAGCCG
GTTTCGACGG CAAGGCCGAA AGCGGAAGCC GAACGCGCGA CGCCGTAG
|
|---|
| Protein sequence | MTPIQFDGCV GWLHEGTRPH GVVICEPLGH EALWLHKLVR SIAEHLADRG FPVLRFHYPA
SGDSLGDEQD PERFENMLAS VRHAVRTLRD NAVLDGLTLI GVRAGAPLAL LASDGLSGIT
RFIALAPVVR GRSYVRELSL VAQRWLDNLP PTVREAVRDE RPFKVLGHAY PDDLLGTLRS
IDLCQAAGQL RELPARALLV DTPYGDGPAL SDTLRARGVA VSIHTCSDWA AAMCEPHRSR
LPNALLDTIG SWIDDDPDAD VRTSTRQHVS DVVLAGSGSV ERVIRMGTQP LIGVLCEPAD
DAMRLAAPTL LIANTAANPR TADGRLAVRL ARSLAARGIR SLRFDSSGIG DSSLRARDDQ
SDIPYSDQMI DDMICAARWL KEAGHHRIVT FGICSGAYAS LHAAERGALA GAITINLPVF
VWPRGQTLAD VVDNQTNSMR GYVASLRSLG KWRRVLLEGR DPRPVLRALI RFVADFTTVP
IKSFMERMGR APDKDTPRGM LHDMSARGIQ AHLLYGTFDP GVDVVVRHFG PVSGAFAHLS
NVSVDTQDGL DHSLHSDAAA QYVVDRCAAL LSGWHAPAEP VSTARPKAEA ERATP
|
|---|
| |