| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3285 |
|---|
| Symbol | |
|---|
| ID | 6126264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 114151 |
|---|
| End bp | 114915 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641650396 |
|---|
| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit |
|---|
| Protein accession | YP_001776931 |
|---|
| Protein GI | 170735671 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.15579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0699829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGG CGCGCGTGAT CTACAACGGC GCACTGCATG CGGCCGAACC GGCCGGCGAC
GGCGCGATCC GCCTCGATAC GGGCAGCATG GTGGCCGAGG ACGCGGTGGC GTGGCTGCCG
CCCGTCGCGC CGCGCACGAC GTTCGCGCTC GGCCTGAACT ACGCCGACCA TGCGAAGGAG
CTCGCGTTCA ACGCGCCGAG CGAACCGCTG ATTTTCCTGA AGGGGCCGAA TACGTTCGTC
GGCCACCGGT CGCTGACCGT GCGCCCCGCG GACGCCACGC ACATGCACTA CGAGTGCGAA
CTGGCCGTCG TGATCGGCCG GCCCGCGCGC CACGTGAGCC GCGCGCAGGC CATCGACTAC
GTGGCCGGCT ATACGGTCGC GAACGACTAC GCGATCCGCG ACTATCTCGA AAACTACTAC
CGCCCGAACC TGCGCGTGAA GAACCGCGAC ACCTGCACGC CGCTCGGGCC GTGGTTCGTC
AGCCGCGACG AGATCGGCGA CGCGGGCGAC CTGACGCTGC GCACGACGGT GAACGGCCGG
GAGACGCAGC GCGGCAGCAC GCGCGACATG GTGTTCGACG TGCCTGCGCT GATCGAGCAC
ATCAGCAGCT TCATGACGCT CTCGCCGGGC GACCTGATCC TGACCGGCAC GCCCGAGGGG
CTGGCGGACA CGAAGCCGGG CGACGAGGTC GTGACCGAAA TCGAAGGAAT CGGCCGGCTC
GTGAACACGA TCGTCGGCGA GGCAGACTAC TATCGCGCCG GCTGA
|
|---|
| Protein sequence | MKTARVIYNG ALHAAEPAGD GAIRLDTGSM VAEDAVAWLP PVAPRTTFAL GLNYADHAKE
LAFNAPSEPL IFLKGPNTFV GHRSLTVRPA DATHMHYECE LAVVIGRPAR HVSRAQAIDY
VAGYTVANDY AIRDYLENYY RPNLRVKNRD TCTPLGPWFV SRDEIGDAGD LTLRTTVNGR
ETQRGSTRDM VFDVPALIEH ISSFMTLSPG DLILTGTPEG LADTKPGDEV VTEIEGIGRL
VNTIVGEADY YRAG
|
|---|
| |