| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3236 |
|---|
| Symbol | |
|---|
| ID | 6126215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 60916 |
|---|
| End bp | 61503 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641650347 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001776882 |
|---|
| Protein GI | 170735622 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.748057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC TGGTTTCGAT GGCCGCGTTC GCGCTCGCCT CGTCGATCAC CCCCGGTCCC
GTCAACATCG TCGCGCTCAG CGCGGGCGCC CGCCATGGCC TCGGCGCGAG CCTGCGCTAC
GCGGCGGGCG CGACGCTCGG CTTCGTCGCG CTGTTCCTGC TGATCGGCCT CGGCCTGCAC
GCGGCGCTCG CGCGCTGGCC CGTGCTGACG ACGGCCACGC AGTGGTCGGG AATCGCGTTT
CTGCTGTATA TGGCGCTGCG GCTCGCGCTC GACGACGGCC GGCTGTCGGC CGATCCCGAC
GTGGCCGGCC CGTCGGCGGC GTCCGGCGCG GCGATGCAGT GGCTCAATCC GAAGGCGTGG
CTTGCGTGCG TGGCCGCGAT GGGCGCGTAT GCGGCCGATG GCGATCGCGC GCAGGTCTGG
CAGTTCGCCG CGCTGTATCT GGTGATCTGC TTCGCGTCGA TCGCATGCTG GGGCTATGCG
GGTGCGTCGC TGCGGCACCG GCTCGCGAAC GCGCGGCGCA TGCGCGTGTT CAACCGGCTG
ATGGCGCTGC TGCTCGCGGG CAGCGCGCTG TTTCTGCTCG ACGTGTAG
|
|---|
| Protein sequence | MSMLVSMAAF ALASSITPGP VNIVALSAGA RHGLGASLRY AAGATLGFVA LFLLIGLGLH
AALARWPVLT TATQWSGIAF LLYMALRLAL DDGRLSADPD VAGPSAASGA AMQWLNPKAW
LACVAAMGAY AADGDRAQVW QFAALYLVIC FASIACWGYA GASLRHRLAN ARRMRVFNRL
MALLLAGSAL FLLDV
|
|---|
| |