Gene Bcenmc03_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2568 
SymbolxseA 
ID6124232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2866592 
End bp2867974 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content72% 
IMG OID641639161 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_001765851 
Protein GI170733904 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0973694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.16842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCG ATTCCCCTTT TTCCGCCCCC GGCGCCACCC GCGGCGGCGA CGAAGTGATT 
CCCGTTTCGG CGCTCAATCG TGCGATTTCG ACGATGCTCG AGCGCTCGTT TCCGTTGCTG
TGGATTTCCG GCGAAGTGTC GAATTTCACG CGCGCCGCGA GCGGCCACTG GTATTTCTCG
ATCAAGGACC AGCAGGCGCA GATGCGCTGC GTGATGTTCC GCGGCCGCGC CCAGTACGCG
GAATTCACGC CGCGCGAAGG CGATCGCATC GAGGTGCGCG CGGTCGTCAC GATGTACGAG
CCGCGCGGCG AAGTGCAGCT CAACGTCGAA GCCGTGCGGC GCACCGGGCA GGGGCGCCTG
TACGAGGCAT TCCTGCGGCT GAAGGCGCAG CTCGAGGCCG AGGGCCTGTT CGCTCCCGAG
CGCAAGCGGC CGCTGCCGGC GCACCCGCGC GCGATCGGTA TCGTCACGTC GCTGCAGGCC
GCCGCGCTGC GCGACGTGCT GACCACGCTC GCCCGGCGCG CGCCGCATAT TCCGGTGATC
GTCTATCCGG CCCCCGTGCA GGGCGCCGGT TCCGCCGAAA AGCTCGTCGC GGCCGTCGCG
ACCGCGAATG CGCGGCGCGA GGTCGACGTG CTGCTGGTCT GTCGCGGCGG CGGCTCGATC
GAGGATCTGT GGTCGTTCAA CGACGAAGCG CTGGCGCGCG CGATCGCGGC GAGCGAGCTG
CCGGTCGTCA GCGGCGTCGG ACACGAAACC GATTTCACGA TCGCTGATTT CGCGGCCGAC
CTGCGCGCGC CGACGCCGAC CGGCGCGGCC GAACTCGCGA GCCCGCAGCG CGCGCTGCTG
CTGCGCGAGG TCGACGAGCG CCAGCGTGCG CTCGCACGCG GCATGGCGCG CCGGCTCGAA
CAGCGCGCGC AGCAGCTCGA CTGGCTCGCG CGCCGGCTCG TGAGTCCGGC CGAGCGGCTG
CAGCGGCAGC GCACGCACGT CCAGCAGCTC GCGGCGCGGC TGGCGTCGGC GGCGTCGCGG
CCGGTGCGCG ATGCCCGTGC GCGTTTCGCG CTCGCGCAGT TGCGCTGGCA GCGTGCGCGG
CCCGATCCGT CGCAGGCGCG CCACGCGCTC GCGGGGCTGT CGCAGCGTCT GGCCAGCGCG
TTGCAGCGTC GTCACGAACG CGACACGGCG CGCGTGTCGG CCTGTGCCGC ACGGCTCGAG
GTGCTGAGCC CGCAGCGCAC GCTGGAGCGC GGCTATGCGG CGCTGATCGA TGCGCAGACG
GGCCGCGCGG TGCGCGCGCC GAACGCGCTG AAGCCGCAGC GGCGCCTGAC CGTGCATCTC
GCCGAAGGCT CGGCGGACGT GTCGCTCGCC GACGTGCAGC CGCGGCTGAC CGATACGATC
TGA
 
Protein sequence
MLSDSPFSAP GATRGGDEVI PVSALNRAIS TMLERSFPLL WISGEVSNFT RAASGHWYFS 
IKDQQAQMRC VMFRGRAQYA EFTPREGDRI EVRAVVTMYE PRGEVQLNVE AVRRTGQGRL
YEAFLRLKAQ LEAEGLFAPE RKRPLPAHPR AIGIVTSLQA AALRDVLTTL ARRAPHIPVI
VYPAPVQGAG SAEKLVAAVA TANARREVDV LLVCRGGGSI EDLWSFNDEA LARAIAASEL
PVVSGVGHET DFTIADFAAD LRAPTPTGAA ELASPQRALL LREVDERQRA LARGMARRLE
QRAQQLDWLA RRLVSPAERL QRQRTHVQQL AARLASAASR PVRDARARFA LAQLRWQRAR
PDPSQARHAL AGLSQRLASA LQRRHERDTA RVSACAARLE VLSPQRTLER GYAALIDAQT
GRAVRAPNAL KPQRRLTVHL AEGSADVSLA DVQPRLTDTI