Gene Bcenmc03_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2217 
Symbol 
ID6123881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2486338 
End bp2487246 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID641638800 
Producthypothetical protein 
Protein accessionYP_001765500 
Protein GI170733553 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.207326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCGCT ACGCCCTCTT CCTCATCCTG TCGATGCTGT TCGTCGGCAG CAACGTCGGT 
ATCGGTAAAT CCATCGTTGT ATTCGTTCCC GTCGCCATCC TCGCCACGCT GCGCTTCGTG
ATCGCGATCG CCGTGCTGTG GCCGCTGTTC AGCCCCGTGA AGATGCGCGC GGTCAAGCGC
GGCGAATGGC TGAACCTGTT CCTGCAGGCG TTCTTCGGCA CCTTCATGTT CACGCTGCTG
ATGCTCAACG GCGTGCAGCG CACGAGCGCG GTGGCCGCGG GCGTCATCAC GAGCACGATC
CCGGCCATCG TCGCGCTGTT CGCGTGGCTG ATCCTGCGTG AAAAACCGAA CGGCCGTGCG
CTCGTGTCGA TCGTGCTCGC GATCGTCGGC GTCGTGACGA TCAACCTCGC CAACGGCAGT
GCGGCCAGCC ACGGCGCGCA GGGCGATGCG TCCGGCTCGC TGGCGGGCAA CCTGCTGATC
CTCGGCGCGG TGTGCTGCGA ATCGATCTAC GTGATCCTGT CGCGCCGGCT CACGCAAACG
CTCGCGCCGA TCGACATCTG CGCGTACACC CACCTGTTCG GCCTGTTCCT GATGCTGCCG
CTCGGCGCGA CCGCGCTGTG GCGCTTCGAT TACGCGAGCG TGCCGGCCGG CACCTGGGCG
CTCGTCGTCT GGTACGGGCT GTCGGCCAGC ATCTTCTCGT TCTGGCTGTG GATGAAGGGC
ATCCGGCACG TGCCGGGCAG CCTCGCCGGC GTGTTCAGCG CGGTACTGCC GATCGCCGCG
GCCGCGTACG GCATCGCGTT CCTCGGCGAG CGCCCGACGC TCGCGCACGG CATCGCGCTC
GCCTGTGTCG TCACCGGCAT CGTGCTCGCA AGCCTGCGCG TGAAACGCGT GCCGGCGGCC
GCTTCCTGA
 
Protein sequence
MNRYALFLIL SMLFVGSNVG IGKSIVVFVP VAILATLRFV IAIAVLWPLF SPVKMRAVKR 
GEWLNLFLQA FFGTFMFTLL MLNGVQRTSA VAAGVITSTI PAIVALFAWL ILREKPNGRA
LVSIVLAIVG VVTINLANGS AASHGAQGDA SGSLAGNLLI LGAVCCESIY VILSRRLTQT
LAPIDICAYT HLFGLFLMLP LGATALWRFD YASVPAGTWA LVVWYGLSAS IFSFWLWMKG
IRHVPGSLAG VFSAVLPIAA AAYGIAFLGE RPTLAHGIAL ACVVTGIVLA SLRVKRVPAA
AS