Gene Bcenmc03_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2126 
Symbol 
ID6123790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2363317 
End bp2364171 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID641638706 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_001765409 
Protein GI170733462 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.304647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0201169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT GCGATTTCGA GGTCGGTCTC GACCAGCCTT TCTTCCTGAT CGCGGGTACC 
TGCGTCGTCG AATCGGAGCA AATGACGATC GACACGGCGG GCCGCCTGAA GGAGATCTGC
GAGAAGCTGA ACGTTCCGTT CATCTACAAG TCGTCCTACG ACAAGGCGAA CCGCAGCTCG
GGCAAGTCGT TTCGCGGCCT CGGAATGGAC GAGGGGCTGC GGATTCTCGG CGAGGTGAAG
CGCCAGCTCG GCCTGCCGGT GCTGACCGAC GTGCATTCGA TCGACGAGAT CGAGCAGGTC
GCGTCGGTCG TCGACGTGCT GCAGACGCCG GCGTTCCTGT GCCGCCAGAC CGACTTCATC
CATGCGTGCG CGCGCTCGGG CAAGCCCGTC AACATCAAGA AGGGCCAGTT CCTCGCGCCG
CACGACATGA AGAACGTGAT CGACAAGGCG CGCGACGCGG CGCGTGAAGC CGGCCTGTCG
GAAGACCGCT TCATGGCGTG CGAGCGCGGC GTCTCGTTCG GCTACAACAA CCTCGTGTCG
GACATGCGTT CGCTCGCGAT CATGCGCGAG ACGAACGCGC CGGTCGTGTT CGATGCGACC
CACTCGGTGC AGTTGCCGGG CGGGCAGGGC ACGAGCTCGG GCGGCCAGCG CGAATTCGTG
CCGGTGCTCG CCCGTGCGGC GGTCGCGACG GGTGTCGCGG GCCTCTTCAT GGAAACGCAT
CCGAATCCGG CCGAGGCGAA GTCGGACGGC CCGAACGCGG TGCCGCTGAA CCGGATGGGC
GCGTTGCTGG AGACCCTCGT CACGCTCGAC CAGGCGGTGA AGCGCAATCC GTTCCTGGAA
AACGATTTCA ATTAA
 
Protein sequence
MKLCDFEVGL DQPFFLIAGT CVVESEQMTI DTAGRLKEIC EKLNVPFIYK SSYDKANRSS 
GKSFRGLGMD EGLRILGEVK RQLGLPVLTD VHSIDEIEQV ASVVDVLQTP AFLCRQTDFI
HACARSGKPV NIKKGQFLAP HDMKNVIDKA RDAAREAGLS EDRFMACERG VSFGYNNLVS
DMRSLAIMRE TNAPVVFDAT HSVQLPGGQG TSSGGQREFV PVLARAAVAT GVAGLFMETH
PNPAEAKSDG PNAVPLNRMG ALLETLVTLD QAVKRNPFLE NDFN