Gene Bcenmc03_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2079 
Symbol 
ID6123743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2312422 
End bp2313519 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content67% 
IMG OID641638658 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001765362 
Protein GI170733415 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0272405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG CCGTCGCCTC TTCCCGTATC GACGCCGCAC GTGCGCGCGT GTCGCCGTCG 
CCCACCCGCC GCGTGTGGCA GCGTTTCAGG CAGCAGCGCC TCGGCTACTG GAGCTTCGTG
ATTTTCGTCG TGGCCTTTGC CGCGAGTCTC GCGGCGCCGC TGTGGTCGAA CGACAAGCCG
CTCGTGGTGC GCTACGACGG CCAGACCTAT TTTCCGATGT TCCATGCGTA CCCGGAGACG
ACCTTCGGCG GCGATTTCCC GACGCCGGCC GACTATCTCG ATCCGTACGT GCGCAAGCGG
CTCGAGGCGC CCGGCAACTT CGTCGTCTAT CCGCCGAACC GCTACTACTA CGACACGCTG
AACTACTTCT CGAACGTGCC GAACCCGGCG CCGCCGTCGC GCGAGAACTG GCTCGGCACC
GACGCGCAGG GCCGTGACCT GCTCGCGCGG CTCGTGTACG GTTTCCGCGT GTCGGTCGAG
TTCGGGCTGA TCCTGACGGT GATCGGCACG CTGCTCGGGA TCGCCGCGGG CGCGGTGCAG
GGCTTCTTCG GCGGGCGCAT CGACATCGTC GGGCAGCGGC TGATCGAGAT CTGGAGTTCG
CTGCCGGAGC TGTACCTGCT GATCATCTTC GCGTCGATCT TCGAGCCGAG CTTCCTGCTG
CTGATCGTGC TGTTGTCGCT GTTCGGCTGG ATCGGCCTCG CCGACTACGT GCGCGCGGAA
TTCCTGCGCA ACCGGACCCA GGACTACGTG CGCGCGGCCC GCGCGATGGG GCTGACGAAC
TGGCAGATCA TCTGGCGCCA CGTGCTGCCG AACAGCCTCA CACCGGTGAT CACGTTCCTG
CCGTTCCGGA TGAGCGGCTC GATCCTCGCG CTCACTAGCC TCGATTTCCT CGGGCTGGGC
GTGCCGCCGC CGACGCCGAG CCTCGGCGAG CTGCTGGCGC AGGGCAAGGG CAACCTCGAC
GCATGGTGGA TCTCGCTGTC GACGTTCGGC GTGCTGGTCG CGACGCTGCT GCTGCTGACC
TTCATGGGCG ACGCGCTGCG CAACGCGCTC GACACGCGGA TCGCCGATTC GGTGCGCGCG
GCGGGAGGCC AGCGATGA
 
Protein sequence
MNRAVASSRI DAARARVSPS PTRRVWQRFR QQRLGYWSFV IFVVAFAASL AAPLWSNDKP 
LVVRYDGQTY FPMFHAYPET TFGGDFPTPA DYLDPYVRKR LEAPGNFVVY PPNRYYYDTL
NYFSNVPNPA PPSRENWLGT DAQGRDLLAR LVYGFRVSVE FGLILTVIGT LLGIAAGAVQ
GFFGGRIDIV GQRLIEIWSS LPELYLLIIF ASIFEPSFLL LIVLLSLFGW IGLADYVRAE
FLRNRTQDYV RAARAMGLTN WQIIWRHVLP NSLTPVITFL PFRMSGSILA LTSLDFLGLG
VPPPTPSLGE LLAQGKGNLD AWWISLSTFG VLVATLLLLT FMGDALRNAL DTRIADSVRA
AGGQR