| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2055 |
|---|
| Symbol | |
|---|
| ID | 6123719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2284560 |
|---|
| End bp | 2286491 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641638627 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001765338 |
|---|
| Protein GI | 170733391 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.035925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGTT TCAATCAGTT CAGCCTTGCG CGCGGCACCA AGCCGCTGTT CGAGTCGACC
TCGTTCGTGC TCAATCCCGG CGAGAAAGCC GGCCTGATCG GCGCGAACGG CGCCGGCAAG
TCGACGCTGT TTTCCGTCCT GCGCGGCGAG CTGCATTCCG ACGGAGGCGA TTTCTCGATG
CCGCCGTCGT GGCGGATCGC CCACGTGTCG CAGGAAACGC CCGCGGTCGA CCGCTCGGCG
CTCGACTACA CGCTCGACGG CGATACCGCG CTGCGCGAGA TCGAGGCCCG CATCGCCGCC
GCGTCGGCCG CGCATGACGG CGCCGCCGAA GCCGACGCGC ACGCGGCATT CGCCGATGCC
GACGGCTATA CCGCGCCGGC CCGCGCCGAA GCGCTGCTGC TCGGCCTGGG CTTCACGCTC
GCGCAAACGC GCGAATCCGT CGCGAGCTTC TCCGGCGGCT GGCGCATGCG CCTGAACCTC
GCGCAGGCGC TGATGTGCCG CTCCGACCTG CTGCTGCTCG ACGAACCGAC GAACCACCTC
GACCTCGACG CGATCGTCTG GCTCGAAGAC TGGCTGCATC GCTACCCCGG CACGCTCGTC
GTGATTTCGC ACGACCGCGA ATTCCTCGAC TCGATCTGCA ACGTCACGCT GCATCTGGAA
AACCGCCAGG TGAAGCGCTA CGGCGGCAAT TACTCGCAGT TCGAAGTGCT GCGCGCGCAG
CAACTGGCGC TGCAGCAAAG CGCGTACGAG AAGCAGCAGA AGACGATCGA GCATCTGCAG
AGCTTCGTCG ACCGCTTCAA GGCCAAGGCG ACCAAGGCCA AGCAGGCGCA AAGCCGGATG
AAGGCGCTCG AGAAGATGGA GCTGATCGCG CCCGCGCACA TCGCGTCGCC GTTCACGTTC
GAATTCCGCA CGCCCGATGC CGCGCCGAAC CCGATGATGG TGATGGAGGA CGTCCGCTGC
GGCTACCACG CCGACGACGG AACGGACATC CCGATCGTCG AGCGCGTCGC GCTGTCGATC
CAGAACGGCC AGCGCATCGG CCTGTTGGGC GCCAACGGCC AGGGCAAGTC GACGCTGATC
AAGACACTGG CCGGCACGCT CGCGCCGCTG TCGGGGCACG TGCGCGACGG CAAGGGGCTG
ACGATCGGCT ATTTCGCGCA GCACCAGCTC GAAACGCTGC GCGAAGACGA TTCGCCGCTC
GCGCATCTGG CACGGCTTGC GCCCGACACG CGCGAGCAGG AACTGCGCGA CTTCCTCGGC
GGCTTCAATT TCTCGGGCGA CATGGCGACC AGCCCGGTCG GGCCGTTCTC GGGCGGCGAA
AAAGCCCGCC TCGCGCTGGC GCTGATCATC TGGCAGAAGC CGAACCTGCT GCTGCTCGAC
GAACCGACGA ACCACCTCGA CCTCGAAACG CGCCACGCGC TGACGATGGC GCTCGCGCAA
TTCGAAGGCA CGCTGATCCT CGTGTCGCAC GATCGTCACC TGCTGCGCGC GACGACCGAC
CAGTTCATGC TGGTCGCGAA GCACCGGCTG CAGCCGTTCG ACGGCGACCT CGACGACTAC
CGCGACTGGC TGCTGCAGCA CGCGGCCGAG CAGCGCGCGG CCGCGAAGGC CGACAGCGCG
GCGGCCGCGG GCGCCGATCC GGGCGTCAAC CGCAAGGATC AGAAGCGTCA GGCGGCCGAG
GAACGCCAAC GGCTGTCCCA GTTGAAGAAG CCGCTGCAGA ACCGCATCAC GAAGCTCGAG
AAGGAAATGG AAGCACTGCA CGCCGAGAAG GCGCGCCTCG ACGCGTTCGT CGCCGATCCG
GCGAGCTACG AAGCCGCGCG CAAGACGGAA CTGACCGACG CGATCCGCAA GCTCGGCGAA
GTCACGACCC GGCTCGAAAC GGTCGAGGCG GACTGGCTCG CCGTGCAGGA AGAACTCGAG
CAGATCGGCT GA
|
|---|
| Protein sequence | MIRFNQFSLA RGTKPLFEST SFVLNPGEKA GLIGANGAGK STLFSVLRGE LHSDGGDFSM
PPSWRIAHVS QETPAVDRSA LDYTLDGDTA LREIEARIAA ASAAHDGAAE ADAHAAFADA
DGYTAPARAE ALLLGLGFTL AQTRESVASF SGGWRMRLNL AQALMCRSDL LLLDEPTNHL
DLDAIVWLED WLHRYPGTLV VISHDREFLD SICNVTLHLE NRQVKRYGGN YSQFEVLRAQ
QLALQQSAYE KQQKTIEHLQ SFVDRFKAKA TKAKQAQSRM KALEKMELIA PAHIASPFTF
EFRTPDAAPN PMMVMEDVRC GYHADDGTDI PIVERVALSI QNGQRIGLLG ANGQGKSTLI
KTLAGTLAPL SGHVRDGKGL TIGYFAQHQL ETLREDDSPL AHLARLAPDT REQELRDFLG
GFNFSGDMAT SPVGPFSGGE KARLALALII WQKPNLLLLD EPTNHLDLET RHALTMALAQ
FEGTLILVSH DRHLLRATTD QFMLVAKHRL QPFDGDLDDY RDWLLQHAAE QRAAAKADSA
AAAGADPGVN RKDQKRQAAE ERQRLSQLKK PLQNRITKLE KEMEALHAEK ARLDAFVADP
ASYEAARKTE LTDAIRKLGE VTTRLETVEA DWLAVQEELE QIG
|
|---|
| |