| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2042 |
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| Symbol | |
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| ID | 6123706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2266766 |
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| End bp | 2268718 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641638614 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001765325 |
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| Protein GI | 170733378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.483684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA AATTAACCGT CAAGAATCCG AAGCCGGCGT CGCCGACTCG CGCCCCTGTC
CGCTCCGGCA GCCTCGTCGC CCGCAAGGCG GTGCGCCCCG CCGCGCCGCC CGCGGGGGAT
AAGCCGGCCC GCCCGAAGAA GGCGCCCGCC GCGGCCGCCG CTACCGGCGA GCGCTCGTTC
AAGCCGCGCG GTGCCGAGCG CGGCACGCGC GCGCCGTATC GCGACAATGC GGCCGGTGAA
GGTGCGAAGC GCAGTTTTGG CGACCGCCGT ACGTCGTCGG ATCGGCCGCC GCGCGGTAGC
GATGACGATG CGCGGCCGCG TCGCGCCGGT GGCGAAGGCG GCGCCCGCGC GCCCTATCGC
GACAACGCAG CCGGCGAAGG CGCAAAGCGC AGTTTTGGCG ACCGACGCAC GTGGTCGGAT
CGGCCACCGC GTCGTAGCGA TGACGATGCA CGGCCGCGTC GCGCCGGTGG CGACGAAGGC
AAACGCCCGT CCTACCGCGA CAACGCAGCC GGCGAAGGCG CAAAGCGCAG CTTCGGTGAT
CGCCGTCCGT CGTCGGATCG GCCGCCGCGC CGCGATGACG ATGCACGGCC GCGTCGCGCC
GGTGCCGACG AAGGCAAACG CCCGTCCTAC CGCGACAACG CGGCCGGCGA AGGCGCAAAG
CGCAGCTTCG GTGATCGCCG CACGTCTTCC GATCGGCCGC CGCGCCGCGA TGACGATGCA
CGTCCGCGCC GCGCCGGTGC CGACGAAGGC AAACGCCCGT CCTACCGCGA CAACGCGGCC
GGCGAAGGCG CGAAACGCAG CTATGGCGAC CGCCGCCCAT CGCCCGATCG CCCGCCCCGC
CGTGATGACG ACACGCGTCC GCGCCGTGCA GCAGGTGGCG ACGACAGCAA ACGCCCGACC
TACCGCGACA AGTCCGCCGG CGAAGGCGCG AAGCGCAGCT TCGGCGATCG CCGCACGTCG
TCCGATCGTC CGCCGCGCCG CAGCGACGAC GATGCACGTC CGCGCCGCGC CGCAGGCGGT
GACGACAGCA AGCGCCCGTC CTACCGCGAC AAGCCCGCCG GCGATGGCGC GAAGCGCAGC
TTCGGCGACC GTCCGGCCCG CCCCGCGCGC GACGGCGAGC GCCGTTCGTT CGGCGCGGTA
AAGACCGCGC AACCCGTCAA GCGCGCGGCG GCCGACGTGG ACTACGGCGA CGAAACGGGC
CTGATGCGCC TGTCGAAGCG GATGTCCGAA CTCGGCATGT GCTCGCGCCG CGAAGCCGAC
GAATGGATCG AAAAGGGCTG GGTGCTCGTC GACGGCGAAC GCATCGACAC GCTCGGCACC
AAGGTGCGCG CCGACCAGAA GATCGAGATC GACGAGCGTG CGAGCGCTGC GCAGGCCGCC
CAAGTGACGA TCCTGCTGCA CAAGCCGGTC GGCTACGTGT CGGGTCAGGC GGAAGACGGC
TACGAGCCGG CGGCCGTGCT GATCACGCGC GCGAACCGCT GGAGCGGCGA CCACTCGCCG
GTGCGCTTCT CCCCGCAACA CCTGCATGCA CTCGCACCGG CCGGCCGTCT CGACATCGAC
TCCACCGGCC TGCTCGTGCT GACGCAGAAC GGCGTGATCG CGAAGCAGTT GATCGGCGAA
CAGTCGGACA TCGACAAGGA ATACCTGGTG CGCGTGCGCT TCGGCGAGCG ACTGATCGAC
ATCGACCAGC ACTTCCCGGC GGAATCGCTC GCGAAGCTGC GCCATGGCCT CGAGCTCGAC
GGCGTCGCGC TGAAGCCCGC GCTGGTGAGC TGGCAGAACG GCGAGCAGTT GCGCTTCGTG
CTGCGCGAAG GCAAGAAGCG CCAGATCCGC CGCATGTGCG AACTGGTCGG CCTCGACGTG
ATCGGCCTGA AACGCGTGCG CATGGGTCGC GTGATGCTCG GCGCGCTGCC GCAAGGCCAA
TGGCGCTATC TGTCCGCCGA CGAGACGTTC TGA
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| Protein sequence | MRTKLTVKNP KPASPTRAPV RSGSLVARKA VRPAAPPAGD KPARPKKAPA AAAATGERSF
KPRGAERGTR APYRDNAAGE GAKRSFGDRR TSSDRPPRGS DDDARPRRAG GEGGARAPYR
DNAAGEGAKR SFGDRRTWSD RPPRRSDDDA RPRRAGGDEG KRPSYRDNAA GEGAKRSFGD
RRPSSDRPPR RDDDARPRRA GADEGKRPSY RDNAAGEGAK RSFGDRRTSS DRPPRRDDDA
RPRRAGADEG KRPSYRDNAA GEGAKRSYGD RRPSPDRPPR RDDDTRPRRA AGGDDSKRPT
YRDKSAGEGA KRSFGDRRTS SDRPPRRSDD DARPRRAAGG DDSKRPSYRD KPAGDGAKRS
FGDRPARPAR DGERRSFGAV KTAQPVKRAA ADVDYGDETG LMRLSKRMSE LGMCSRREAD
EWIEKGWVLV DGERIDTLGT KVRADQKIEI DERASAAQAA QVTILLHKPV GYVSGQAEDG
YEPAAVLITR ANRWSGDHSP VRFSPQHLHA LAPAGRLDID STGLLVLTQN GVIAKQLIGE
QSDIDKEYLV RVRFGERLID IDQHFPAESL AKLRHGLELD GVALKPALVS WQNGEQLRFV
LREGKKRQIR RMCELVGLDV IGLKRVRMGR VMLGALPQGQ WRYLSADETF
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