| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2006 |
|---|
| Symbol | |
|---|
| ID | 6123670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2228221 |
|---|
| End bp | 2228844 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641638578 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_001765289 |
|---|
| Protein GI | 170733342 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC GCTCCACGCC AGTCGGACAT GCTGCCGTGA CTCAACTGAC GCTACCCGGA
TTCGATGCGC CGCCGCCGGC TCCCGTGCAC CGCTTCTTTT TCGCCGTGAT GCCGGATCCG
GCCACGGCCG CGCGCATTGC CGGCATGGCC AAAAGCTTGC AGCAGAAAAA GGACAGTCCG
ATGGGCACCG AGCGTCTGCA CATCACGCTG GGCTCGCTAG GTGACTTCGC TTACGTGCCG
GGCGCTACGC TTGCACGGGC CCGCGCGGTC GCGGATCGCA TGGAAGTGCC GTCTTTCTCC
GTGAGGTTCG ACAAGATCAT CAGCTTCAAC AGGCGGTCCG GTCGTCAGCC GCTGGTGCTG
ATGGGGAAGG CCGGTCTGGA AGGCTTGATC GATTTTCGGC GGCAGTTGCG AGACGCGTTG
AAAAGGGTAG GCGTGCCTGT TTTCCCCTCG AGTTTCACCC CGCACGTGAC GCTGCTGTAT
GGCGTGCAGA GGCCCGATGA GTATCGGATC GAGCCGATTA CCTGGACCGT GTTCGACTTC
GTCCTGATCG ATAGCTGGCT CGGCAAGTCG CACTACGACG TGTTGGGGCG CTGGCCGTTG
ACGACCGGCA GCGCGTCGGG ATGA
|
|---|
| Protein sequence | MKFRSTPVGH AAVTQLTLPG FDAPPPAPVH RFFFAVMPDP ATAARIAGMA KSLQQKKDSP
MGTERLHITL GSLGDFAYVP GATLARARAV ADRMEVPSFS VRFDKIISFN RRSGRQPLVL
MGKAGLEGLI DFRRQLRDAL KRVGVPVFPS SFTPHVTLLY GVQRPDEYRI EPITWTVFDF
VLIDSWLGKS HYDVLGRWPL TTGSASG
|
|---|
| |