Gene Bcenmc03_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1888 
Symbol 
ID6123552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2097476 
End bp2097937 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID641638457 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001765171 
Protein GI170733224 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000352588 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGTCG AAGTTGACCG TCAAGTTCCC GATTTCACCG CACCGGCCAC GGGCGGCGAC 
GTTTCGCTGT CCGACCTGAA GGGCAAGAAG CTCGTGCTGT ACTTCTATCC GAAGGACAAC
ACGCCGGGCT GCACGACCGA AGGGCTGCAG TTCCGCGATC TCTATCCGAA GTTCAAGAAG
GCCGGTGCGG AAGTCATCGG CGTGTCGCGC GACAGCCTGC GCTCGCACGA CAATTTCAAG
GCCAAGCTCG AGCTGCCGTT CCCGCTGATC TCCGATGCCG ACGAAGCACT GTGCGCGCTG
TTCGATGTCA TCAAGATGAA GAAAATGTAT GGCAAGGAAG TGCGCGGAAT CGAGCGCTCG
ACGTTCCTGC TCGACGCCGA CGGCGTGCTT CGCCAGGCAT GGCGCGGCAT CAAGGTACCG
GGTCACGTGG ATGACGTGCT AAAGGCTGTA CAAGCGCTTT GA
 
Protein sequence
MSVEVDRQVP DFTAPATGGD VSLSDLKGKK LVLYFYPKDN TPGCTTEGLQ FRDLYPKFKK 
AGAEVIGVSR DSLRSHDNFK AKLELPFPLI SDADEALCAL FDVIKMKKMY GKEVRGIERS
TFLLDADGVL RQAWRGIKVP GHVDDVLKAV QAL