| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1887 |
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| Symbol | |
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| ID | 6123551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2096470 |
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| End bp | 2097366 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638456 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001765170 |
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| Protein GI | 170733223 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.65071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000465895 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTCGTA TCGTCCTCAA GATCGACGTC GACACGCTGC GCGGCACGCG CGAAGGCGTG
CCGAACCTCG CGCGCATCTT CGATCGCTTC AATGCGCGCG CGACCTTCCT CTTCAGCCTC
GGCCCGGATC ACACCGGCTG GGCGTTGCGG CGCGTGTTCC GCCCGGGCTT CCTGAAGAAG
GTGTCGCGCA CGTCGGTGGT CGAACACTAC GGCGTGAAGC AGCTGATGTA CGGCGTGCTG
CTGCCCGGCC CCGACATCGG CCGCCGCGCG ATCGCCGACA TGCGCGCGAT TCACGAAGCC
GGCTTCGAAT GCGGGATCCA CACGTGGGAT CACGTGTATT GGCAAGACAA CGTGCGCGTA
CGCGACCGCG ACTGGACCGC GCGTGAAATG CAGAAGAGTC ACGCGCGCTT CATCGAGATC
TTCGGCGCGC CGCCCGTCAC GCACGGCGCG GCCGGCTGGC AGATGAACGA TGCCGCGTTC
GAGCAGATCG ACGCGTGGGG GATGCGCTAC GCATCCGACG GTCGCGGCCA CTCGCCGTAC
CTGCCCGTCG TCGGCGGCCG CACGCTGTCG CATGTGCAGA TGCCGACCAC GCTGCCGACG
CTCGACGAAG TACTCGGCAT CGACGGCGTC GACACGCACA ACGTCGCCGC GCACATCCTC
GCGTTCACCG CAACCAATCC GCACGACCAG GTGTTCACGC TGCATGCGGA GCTGGAAGGC
CAGAAGCTCG CGCCCGTGTT CGAGCAACTG CTCGCCGGCT GGCGTGCGCA AGGCCACACG
TTCGCGACGA TGGGCGACTA CCACGCGACG CTGGACCGCG ACTCGCTGCC ATCGTACCCT
GTCACGTGGG GCGAAATCCC CGGCCGCTCC GGCGAACTGA TCGTCCAGCC CGACTGA
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| Protein sequence | MARIVLKIDV DTLRGTREGV PNLARIFDRF NARATFLFSL GPDHTGWALR RVFRPGFLKK
VSRTSVVEHY GVKQLMYGVL LPGPDIGRRA IADMRAIHEA GFECGIHTWD HVYWQDNVRV
RDRDWTAREM QKSHARFIEI FGAPPVTHGA AGWQMNDAAF EQIDAWGMRY ASDGRGHSPY
LPVVGGRTLS HVQMPTTLPT LDEVLGIDGV DTHNVAAHIL AFTATNPHDQ VFTLHAELEG
QKLAPVFEQL LAGWRAQGHT FATMGDYHAT LDRDSLPSYP VTWGEIPGRS GELIVQPD
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