Gene Bcenmc03_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1885 
Symbol 
ID6123549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2094457 
End bp2095404 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID641638454 
Productputative formyltransferase 
Protein accessionYP_001765168 
Protein GI170733221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000244317 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCGC GCGCGGTCGT CTTCGCGTAT CACAACGTCG GCGTGCGGTG CCTGCAAGTG 
TTGCTCGCAC GCGGCGTCGA CGTCGCGCTG GTCGTCACGC ACGAGGACAA TCCGAACGAG
AACATCTGGT TCGGCAGCGT CGCATCCGTC GCGGCCGAGC ACGGCATTCC GGTCGTCACG
CCGGCCGACT CCGCCGATCC GGCGCTGCGC CGCGCGGTGT CCGACGCGCA GCCCGATTTC
ATCTTCTCGT TCTACTACCG CCACATGCTG CCGGTGGACC TGCTTGCGAT CGCGCCGCGC
GGCGCGTACA ACATGCACGG TTCGCTGCTG CCGAAATACC GGGGTCGGGT ACCGACCAAC
TGGGCCGTGC TGAACGGCGA GACCGAGACC GGCGCGACGC TGCACGAGAT GGCCGCCAAG
CCCGACGCGG GCGCGATCAT CGCCCAGACC GCGGTGCCGA TCCTGCCGGA CGACACGGCT
GCGCAGGTGT TCGACAAGGT TACGGTGGCC GCCGAGCAGA CGCTGTGGCG CGTGCTGCCC
GCGCTGCTCG CGGGCGAGGC GCCGCACCTG CCGAACGATC TCGCGACCGG CAGCTACTAC
GGCGGGCGCA AGCCCGAGGA CGGCCGCGTC GACTGGTCGA AGCCGGCCGC GCAGGTCTAC
AACCTGGTGC GCGCGGTCGC GCCCCCGTAT CCGGGCGCCT TCACGGACGT CGACGGCGCG
CGCTTCGTGA TCGCGCGGGC GCGCCTCGCG GCGCCCGGCA GCGCGGCAGC GGCCGCCGCA
GCAGATTTGC CGCCCGGCCT GCACGTAAGC GATAATGCGC TATTCGGCGT CTGCGGCGAC
AGCCGCGCCC TATCCATTCT CGAACTCCGC CAGCAGCGCG ACGGCAGCGA AACCGTCGTG
ACGCCCGCGG AATTCGCGCA GTTCATTCAT TCTTCCCGTC ATTCATGA
 
Protein sequence
MKPRAVVFAY HNVGVRCLQV LLARGVDVAL VVTHEDNPNE NIWFGSVASV AAEHGIPVVT 
PADSADPALR RAVSDAQPDF IFSFYYRHML PVDLLAIAPR GAYNMHGSLL PKYRGRVPTN
WAVLNGETET GATLHEMAAK PDAGAIIAQT AVPILPDDTA AQVFDKVTVA AEQTLWRVLP
ALLAGEAPHL PNDLATGSYY GGRKPEDGRV DWSKPAAQVY NLVRAVAPPY PGAFTDVDGA
RFVIARARLA APGSAAAAAA ADLPPGLHVS DNALFGVCGD SRALSILELR QQRDGSETVV
TPAEFAQFIH SSRHS