| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1871 |
|---|
| Symbol | |
|---|
| ID | 6123535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2078778 |
|---|
| End bp | 2081375 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638440 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_001765154 |
|---|
| Protein GI | 170733207 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.914514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00068735 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG ACAAGCTCAC CACCAAGTTC CAGGAAGCAC TCGCGGACGC GCAAAGCCTT
GCGGCAGGCC GCGACAATCA ATACATCGAA CCCGTTCACG TGCTCGCGGC GCTGGTCGCG
CAGCAGGACG GCTCGGCCCG CTCGCTGATG TCGCGCGCGG GCGTTCACGT GCAGGCGCTG
CAAGGCGCGC TGAACGAAGC CATTTCGCGC CTGCCGCAAG TGACGGGCAC GGGCGGCGAC
ATCCAGATCG GCCGTGAACT CGCCGGGCTG CTGAACCAGG CCGACAAGGA AGCGCAGAAG
CTCAACGACA CGTTCATCGC GAGCGAGATG TTCCTGCTCG CCGTGTCCGA CGACAAGGGC
GACGCCGGCA AGCTCGCGCG CCAGCACGGC CTCACGCGCA AGTCGCTCGA AGCCGCGATC
GCCGCGGTGC GCGGCGGCTC GCAGGTGCAC AGCCAGGATG CGGAAAGCCA GCGCGAGGCG
CTGAAGAAGT ACACGGTCGA CCTGACCGAG CGCGCCCGCG CGGGCAAGCT CGATCCGGTG
ATCGGCCGCG ACGACGAAAT CCGCCGCTCG ATCCAGATCC TGCAGCGCCG CACCAAGAAC
AACCCGGTGC TGATCGGCGA GCCGGGCGTC GGCAAGACCG CGATCGTCGA AGGGCTCGCG
CAGCGGATCG TCAACGGCGA AGTGCCCGAG ACGCTGAAGG GCAAGCGCGT GTTGTCGCTC
GACATGGCCG CGCTGCTCGC CGGCGCGAAG TATCGCGGCG AGTTCGAGGA GCGCCTGAAG
GCGGTGCTCA ACGACATCGC GAAGGACGAA GGCCAGACGA TCGTCTTCAT CGACGAAATC
CACACGATGG TCGGCGCGGG CAAGGCCGAA GGCGCGATGG ATGCAGGCAA CATGCTGAAG
CCGGCGCTGT CGCGCGGCGA ACTGCACTGC ATCGGCGCGA CCACGCTCGA CGAATACCGC
AAGTACATCG AGAAGGACGC CGCGCTCGAA CGCCGCTTCC AGAAGGTGCT CGTCGACGAG
CCGAGCGTCG AGGCGACGAT CGCGATCCTG CGCGGGCTGC AGGAGAAGTA CGAACTGCAC
CACGGTGTCG ACATCACCGA CCCGGCGATC GTCGCCGCGG CCGAGCTGTC GCATCGCTAC
ATCACCGACC GCTTCCTGCC CGACAAGGCG ATCGACCTGA TCGACGAAGC CGCTTCGAAG
ATCAAGATGG AAATCGATTC GAAGCCCGAA GAGATGGACA AGCTCGACCG TCGTCTGATC
CAGCTGAAGA TCGAGCGCGA AGCGGTGAAG AAGGAGCAGG ACGAAGCGTC GCAGAAGCGC
CTGCAGCTGA TCGAGGAAGA GATCGACCGC CTCGGCCGCG AATATGCGGA CCTGGAAGAG
ATCTGGACCG CCGAGAAGGC CGCGGTGCAG GGCAGCGCGC AGCTCAAGGA AGATATCGAG
AAGGTGCGGG CCGACATCGC GCGCCTGCAG CGGGAAGGTA AGCTGGAGAA GGTCGCCGAG
CTGCAGTACG GCAAGCTGCC GCAGCTCGAG GCCCAGCTGA AGCAGGTCAC GCAGGCCGAA
GAGCAGGAGC AGCACAACCC GACGCGCCCG CGCTTGCTGC GCACGCAGGT CGGCGCGGAG
GAAATCGCGG AAGTCGTGTC GCGTTCGACG GGCATTCCCG TGTCGCGGAT GATGCAGGGC
GAACGCGAGA AGCTGCTGCA CATCGAGGAA AAGCTGCACG AGCGCGTGGT CGGCCAGGAC
GAGGCGATCA GCGCGGTGGC GGACGCGATC CGTCGTTCGC GCGCGGGTCT CGCCGATCCG
AACCGTCCGT ACGGCTCGTT CCTGTTCCTC GGCCCGACGG GGGTCGGCAA GACCGAGCTG
TGCAAGGCGC TGGCGTCGTT CCTGTTCGAT TCGGAAGAAC ACCTGATCCG CATCGACATG
AGCGAGTTCA TGGAGAAGCA CAGCGTCGCG CGGCTGATCG GCGCGCCGCC GGGCTACGTC
GGCTACGAGG AAGGCGGTTA CCTGACGGAA GCCGTGCGCC GCAAGCCGTA CAGCGTGATC
CTGCTCGACG AGATCGAGAA GGCGCATCCG GACGTGTTCA ACGTGCTGCT GCAGGTGCTC
GACGACGGCC GCATGACGGA CGGGCAGGGG CGCACGGTCG ACTTCAAGAA CACGGTCATC
GTGATGACGT CGAACCTCGG TTCGCAGGTG ATTCAGGCGA TGACGGGCGC GCCGCAGGAC
GAGATCAAGG ACGCGGTGTG GCTCGAGGTG AAGCAGCATT TCCGCCCCGA GTTCCTGAAC
CGGATCGACG ACGTCGTGGT GTTCCATGCG CTCGACCGCA GCAACATCGA GTCGATCGCG
AAGATCCAGC TGGCGCGCCT GCACGACCGG CTCGCGAAGC TGGACATGGC GCTCGACGTG
TCGCCCGCTG CGCTCGAACA GATCGCGAAG GTCGGCTACG ATCCGGTGTT CGGTGCGCGG
CCGCTGAAGC GCGCGATCCA GCAGGAGATC GAGAATCCGG TCGCGAAGCT GATCCTCGCC
GGCCGCTTCG GTCCGAAGGA CGTGATTCCG GTCGACGTCA ACGACGGCCA GTTCGTGTTC
GACCGCGTCG TGCACTGA
|
|---|
| Protein sequence | MRIDKLTTKF QEALADAQSL AAGRDNQYIE PVHVLAALVA QQDGSARSLM SRAGVHVQAL
QGALNEAISR LPQVTGTGGD IQIGRELAGL LNQADKEAQK LNDTFIASEM FLLAVSDDKG
DAGKLARQHG LTRKSLEAAI AAVRGGSQVH SQDAESQREA LKKYTVDLTE RARAGKLDPV
IGRDDEIRRS IQILQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE TLKGKRVLSL
DMAALLAGAK YRGEFEERLK AVLNDIAKDE GQTIVFIDEI HTMVGAGKAE GAMDAGNMLK
PALSRGELHC IGATTLDEYR KYIEKDAALE RRFQKVLVDE PSVEATIAIL RGLQEKYELH
HGVDITDPAI VAAAELSHRY ITDRFLPDKA IDLIDEAASK IKMEIDSKPE EMDKLDRRLI
QLKIEREAVK KEQDEASQKR LQLIEEEIDR LGREYADLEE IWTAEKAAVQ GSAQLKEDIE
KVRADIARLQ REGKLEKVAE LQYGKLPQLE AQLKQVTQAE EQEQHNPTRP RLLRTQVGAE
EIAEVVSRST GIPVSRMMQG EREKLLHIEE KLHERVVGQD EAISAVADAI RRSRAGLADP
NRPYGSFLFL GPTGVGKTEL CKALASFLFD SEEHLIRIDM SEFMEKHSVA RLIGAPPGYV
GYEEGGYLTE AVRRKPYSVI LLDEIEKAHP DVFNVLLQVL DDGRMTDGQG RTVDFKNTVI
VMTSNLGSQV IQAMTGAPQD EIKDAVWLEV KQHFRPEFLN RIDDVVVFHA LDRSNIESIA
KIQLARLHDR LAKLDMALDV SPAALEQIAK VGYDPVFGAR PLKRAIQQEI ENPVAKLILA
GRFGPKDVIP VDVNDGQFVF DRVVH
|
|---|
| |