Gene Bcenmc03_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1860 
Symbol 
ID6123524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2067760 
End bp2068725 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content73% 
IMG OID641638429 
Productlipoyl synthase 
Protein accessionYP_001765143 
Protein GI170733196 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.328301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0230564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CGCTCGAACG ACCCAGCCTC ACGGCGCTCG GCCAGCCCGG CGCGAGAAGT 
CGCGACAAGC TCGCGCGCAT TCCGGTGCGC GTCGAGCCCG CGGCCGGCGC GGCGCTGCCG
AAGCCGCCGT GGCTGCGCGC GCGGCCGATG ATGAGCGCGG CGGTGGCCGA CATGGCCGCC
GTGCTGCGCG AGCATCGGCT GCATTCCGTC TGCGAGGAGG CGATGTGTCC GAACATCGGC
GAATGCTTCG CGCAGCGCAC CGCGACCTTC ATGATCATGG GCGGGCTGTG TACGCGGCGT
TGCCCGTTCT GCGATGTCGC GCACGGCCGC CCCGAGCCGC TCGATCCCGA CGAGCCCGCC
CGGCTGGCCG ACGCGGCGGC GGCGCTCGGG TTGCGCTACG TCGTGATCAC GTCGGTCGAC
CGCGACGACC TGCGCGACGG CGGCGCCGCG CATTTCGCCG CGTGCATCGC GGCGGTGCGC
GCGAGCGTGC CGGGTATCGG CGTCGAGGTG CTGACGCCGG ACTTCCGCGG CCGCGCGGCG
CGTGCGCTCG ACGCGCTGTC GTCGGCGTGG CCCGATGTGT TCAACCACAA CATCGAGACG
GTGCCGTCGC TGTATCGCGC GGCGCGGCCG GGCGCCGACT ATCGCGGCTC GCTCGAACTG
CTCGCCCGGG CGAAGGCCGC GCGGCCGACG CTCGTAACGA AATCGGGCTT GATGCTCGGG
CTGGGCGAGC GCGACGACGA GGTGCGCGAC ACGCTGCGCG ACCTGCGCGC ACACGAGGTC
GACGTGCTGA CGCTCGGCCA GTATCTGGCA CCGTCGGAAC ACCATTTGCC GGTGCGGCGC
TACTTGAGCC CCGAGGCCTT CGCCGCATGG CACGACGAGG CGCTCGCGCT CGGTTTCAGG
GAAGTCGTCG CCGGCCCGCT CGTGCGCTCG TCATATCACG CGGCCGACGT GCTGGAGAAC
GCGTAG
 
Protein sequence
MTAALERPSL TALGQPGARS RDKLARIPVR VEPAAGAALP KPPWLRARPM MSAAVADMAA 
VLREHRLHSV CEEAMCPNIG ECFAQRTATF MIMGGLCTRR CPFCDVAHGR PEPLDPDEPA
RLADAAAALG LRYVVITSVD RDDLRDGGAA HFAACIAAVR ASVPGIGVEV LTPDFRGRAA
RALDALSSAW PDVFNHNIET VPSLYRAARP GADYRGSLEL LARAKAARPT LVTKSGLMLG
LGERDDEVRD TLRDLRAHEV DVLTLGQYLA PSEHHLPVRR YLSPEAFAAW HDEALALGFR
EVVAGPLVRS SYHAADVLEN A