| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1841 |
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| Symbol | rumA |
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| ID | 6123505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2046651 |
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| End bp | 2048048 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638410 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_001765124 |
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| Protein GI | 170733177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.874713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.190141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAG CCGTCCCCAC TTCTGCGCGC AAATCGAAAA ACGCGCCCGT CGCGCCCGGG
CCTGCCCCGG TTCTCGAGAT CGAATCGCTC GACATGGAAG CGCGCGGTGT CGGCCGCACG
ATGACCGAGG ACGGCGAGTC GGGCAAGGTG ATCTTCGTCG AAGGCGCGCT GCCGGGCGAA
CGCGTGACCT ATTCGAGCTA TCGCCGCAAG CCGAGCTACG AGCAGGCGAC GGTTGTCGAC
ATTCTGCGCC CGAGCGTGAT GCGCACCCAG CCGAAGTGCA CATTCTTCGG CACCTGTGGC
GGCTGCTCGA TGCAGCATCT CGACATGCGC GCACAGGTGG CGGTCAAGCA GCGCGTGCTC
GAAGACAACC TGTGGCACCT GGCGAAGCTG CGCGCGGAAA CGATGTTCGC GCCGATCCAC
GGCCCGTCGT GGGGCTATCG CTACCGGGCA CGCCTGACCG TGCGCAACGT CGCGAAGAAG
GGCGGCGTGC TGGTCGGATT CCACGAGAAG AAGAGTAGCT ATGTGGCCGA CATGACGAGC
TGCGAAGTGC TGCCGCCGCA CGTGTCGGCG ATGCTCGTGC CGCTGCGCCG GCTCGTCGAG
GGGCTGTCGA TTCGCGACCG GATGCCGCAG ATCGAACTCG CGGTCGGCTC GACCGTCACG
GCGCTCGTGC TGCGCGTGCT GGAGCCGATC AACGCGGACG ACGAAGTGCT GCTGCGCGCG
TTCGCCGACG AGCACAAGGT GCAGTTCTGG CTGCAGCCGA AGGGGCCGGA CACGGTGACG
CCGTTCTATC CGCTCGACGT GTCGCTCGAC TACACGCTGC CGGAATTCGG TATCCGCATG
CCGTTCAAGC CGACCGATTT CACGCAGGTC AATCACCAGA TCAACCGCGT GCTGGTGGGG
CGTGCGCTGC GTCTGCTCGC GCCGTCGCGC GACGATCGCG TGCTCGACCT GTTCTGCGGG
ATCGGCAACT TCACGCTGCC GCTCGCGCGG CTGTCGCGCG AAGTGATGGG CATCGAGGGC
AGCGACACGC TGACCACGCG TGCGCTGGCG AACGCCCGCG AAAACGGTGT CGACGGCCAC
ACGACGTTCG CGTGCCGGAA CCTGTTCGAA GTGACGGGCG ACGATCTGCG CGCGCTCGGC
GCATTCGACA AGTTCCTGAT CGACCCGCCG CGCGAAGGCG CGCTCGCGGT GTCGAAGGCG
TTGGCCGAGA TCGCGCAGAG CGGCGCAGGC CCGTTGCCGA AGCGCATCGT CTACGTGTCG
TGCAACCCGT CGACGCTCGC GCGCGATGCG GGCCTGCTCG TGCACGAGGC CGGCTACCGG
CTGAAGGGCG CCGGGGTCGT GAACATGTTC CCGAATACGT CGCACGTCGA ATCGATCGCG
CTGTTCGAGC GCGACTGA
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| Protein sequence | MSEAVPTSAR KSKNAPVAPG PAPVLEIESL DMEARGVGRT MTEDGESGKV IFVEGALPGE
RVTYSSYRRK PSYEQATVVD ILRPSVMRTQ PKCTFFGTCG GCSMQHLDMR AQVAVKQRVL
EDNLWHLAKL RAETMFAPIH GPSWGYRYRA RLTVRNVAKK GGVLVGFHEK KSSYVADMTS
CEVLPPHVSA MLVPLRRLVE GLSIRDRMPQ IELAVGSTVT ALVLRVLEPI NADDEVLLRA
FADEHKVQFW LQPKGPDTVT PFYPLDVSLD YTLPEFGIRM PFKPTDFTQV NHQINRVLVG
RALRLLAPSR DDRVLDLFCG IGNFTLPLAR LSREVMGIEG SDTLTTRALA NARENGVDGH
TTFACRNLFE VTGDDLRALG AFDKFLIDPP REGALAVSKA LAEIAQSGAG PLPKRIVYVS
CNPSTLARDA GLLVHEAGYR LKGAGVVNMF PNTSHVESIA LFERD
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