Gene Bcenmc03_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1769 
Symbol 
ID6123440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1973482 
End bp1974120 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID641638345 
ProductOmpW family protein 
Protein accessionYP_001765059 
Protein GI170733112 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.51453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA CGATTCGAAC TTGTGTCACC GCCGCCGCCG TCGCGGCCGC CATCGCGATG 
CCGTCGCTGT CGCACGCGGC GTCGCCGGGC GACGGCATCA ATCAGGGTGA CGTACTGGTC
CGGCTGCGCG CGATCAGCAT CCAGCCGAAC GAGCGCGCGA GCGACACGCT CGGCGCGATC
AACACGGGCG TGAACAACGC GATCGTGCCC GAGCTCGACT TCACGTACAT GATCCGCGAC
TACCTCGGCG TCGAGCTGAT CCTCGGCACG TCGCGGCATC AGCTGACGTC GAGCCTCGGC
AATCTCGGCG GCGTGGGCGT GCTGCCGCCG ACGCTCTTGC TGCAGTATCA CTTCAACCAT
GCGGGCAAGG TGCGCCCGTA CGTCGGCGCC GGGTTGAACT ACACGTACTT CTACAACAAC
GGGCTCAACG TCGGCGGGGA GGGCGTGTCG ATCAACAAGA GCAGCTTCGG CCCCGCGCTG
CAGTTCGGCG TGGACGTGCA GTTGACCAAG AAGGTGTTCA TGAACGTCGA CGTGAAGAAG
ATCTGGATGA GCACCGATGC GACGCTGGGC GACAAGGGCA TCGGCACGCT GCACATCGAT
CCGCTGATCG TCGGCGTGGG CGTCGGGATG AAGTTCTAG
 
Protein sequence
MHKTIRTCVT AAAVAAAIAM PSLSHAASPG DGINQGDVLV RLRAISIQPN ERASDTLGAI 
NTGVNNAIVP ELDFTYMIRD YLGVELILGT SRHQLTSSLG NLGGVGVLPP TLLLQYHFNH
AGKVRPYVGA GLNYTYFYNN GLNVGGEGVS INKSSFGPAL QFGVDVQLTK KVFMNVDVKK
IWMSTDATLG DKGIGTLHID PLIVGVGVGM KF