Gene Bcenmc03_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1686 
Symbol 
ID6123361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1876517 
End bp1877689 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID641638266 
Producthypothetical protein 
Protein accessionYP_001764980 
Protein GI170733033 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGCC AACCTCATGG AACAGTTGTG AGAGCCCGGC AGATCGTGCA CGTACGTCCG 
ACCGTCGATC TCGTTCGCGT CATACTGGGC ATTGTGACGC TGTCGCTACT GATTTGCGGC
AGCCTGTATA TCCTGCGCCC GTTTCTGCTC GCGCTCGTCT GGGCCGCCAC GATTGTCGTC
GCGACTTGGC CACTCCTGCA CGAGGTGCAG CGCCGTCTGC GATGTCGCCG CGGGCCGGCA
GTGATCGTGA TGTTGCTGGC ATTGATGGTC GTGATCGTGC TTCCCATCTA TGGCGCGGTA
TCGACGCTGG CAGCCCATGC AGAAGAGATC ATGACACTCC TGAAAGGCTT GCCGAACTAC
ACGCTTCCGC CGCCGCCGGG ATGGCTTGCC AAGCTGCCGC TCGCCGGCAC GCATGCCACG
CGCGAATGGC AAACGCTGTC TGACGCAGGG CCGGGTGGCG TCCTGGCGAC GCTGCAGCCG
TATGCGAGCC GCCTTGCCAG TTGGCTTCTC GTACGCGCTA GCGCGATTGG TGTGCTCGTG
CTTCATCTGC TGCTCACAGT CATCATATGC GGCATTCTTT TCGCGAAGGG GGAAGCGGTC
GGGCTCACTG TGACCCGCGT TGCACAGTGC GTGGCACCTG CGAACGGTGC GGCCATGGTG
CGGCTCGTCG AACACGCGAT TCGCGCGGTC GCACTGGGCG TCATGGTCAC GGCGCTAGCC
CAATCCGCGT TGGGCGGCCT CGGCCTGTGG GGCGCGAGCG TCCCGTATGC CGGCGTCCTG
ACAGCGATCT TGTTCATCTT CTGTCTTGCT CAACTGGGCC CGCTGTTACC GCTATTGGCT
TGTGTCACGT GGCTGTTCGT GCACGATGCA AAGCTTGCGG CGATCCTGCT ATTCGGCTGG
TCCCTCGGTG TGACGGCACT GGACAACAGC TTGCGTCCGA TTCTGATCCG CCGCTCCATT
GCGTTGCCGA TGGTCCTCAT ACTTGCCGGC GTGCTGGGTG GCCTGATTGC GTTCGGCATG
ATCGGGCTGT TTATCGGGCC AGTGATGCTC GCCGTCACCT ACGCCCTTAT GGAGGCCTGG
CTCGACACTC AGGAGGCCGC GCGTGGCGCA GCCGATACGC GGGCCACCTC CGCCCCGCCT
ATCGCTGCAA ACGAACCTGC GCCCCATGAG TGA
 
Protein sequence
MNRQPHGTVV RARQIVHVRP TVDLVRVILG IVTLSLLICG SLYILRPFLL ALVWAATIVV 
ATWPLLHEVQ RRLRCRRGPA VIVMLLALMV VIVLPIYGAV STLAAHAEEI MTLLKGLPNY
TLPPPPGWLA KLPLAGTHAT REWQTLSDAG PGGVLATLQP YASRLASWLL VRASAIGVLV
LHLLLTVIIC GILFAKGEAV GLTVTRVAQC VAPANGAAMV RLVEHAIRAV ALGVMVTALA
QSALGGLGLW GASVPYAGVL TAILFIFCLA QLGPLLPLLA CVTWLFVHDA KLAAILLFGW
SLGVTALDNS LRPILIRRSI ALPMVLILAG VLGGLIAFGM IGLFIGPVML AVTYALMEAW
LDTQEAARGA ADTRATSAPP IAANEPAPHE