| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1598 |
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| Symbol | |
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| ID | 6123274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1765206 |
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| End bp | 1766408 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641638179 |
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| Product | periplasmic multidrug efflux lipoprotein precursor |
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| Protein accession | YP_001764893 |
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| Protein GI | 170732946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.671811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.334674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA AACGCACCCA GTGGCGCCGC ATGCGGCTGG CGCCGTTCGC GCTCGCGGCC
CTGCTGGCCG TGGCCGGATG TGGAAAGGGC GACAAGGATG CCGCGCCGGA GACCGCGAAG
CAGGCGACTG TCGTGACGGT GCGCCCGACG GCCGTGCCGA TGAGCGTCGA ACTGCCGGGC
CGGCTCGACG CGTACCGGCA GGCGGAAGTT CGCGCCCGGG TCGCGGGCAT CGTCACCGCA
CGGACCTACG AGGAAGGCCA GGAAGTGAAG CAGGGCGCGG TGCTGTTCCG CATCGATCCC
GCGCCGCTGA AGGCCGCACG CGACGCCGCG CAGGGCGCGC TCGCGAAGGC GCAGGCCGCC
GCGCTCGCGG CGACCGACAA GCGCCGCCGT TACGACGATC TCGTGCGCGA CCGCGCGGTG
AGCGAGCGCG ACCACACCGA GGCCGTCGCG GCCGATACGC AGGCGAAGGC CGAGGTCGCA
TCCGCGAAGG CCGAACTCGC GCGCGCGCAG TTGCAGCTCG ACTACGCGAC CGTCACCGCG
CCGATCGCGG GCCGAGCGCG GCGCGCGCTC GTGACCGAGG GTGCGCTCGT CGGCCAGGAC
CAGGCGACGC CGCTCACGAC CGTCGAGCAG CTCGATCCGA TCTACGTGAA CTTCTCGCAG
CCGGCCGCCG ACGTGGACGC ATTGCGCCGC GCGGTGAAGA GCGGGCGCGC GACGGGCATC
GCGCAGCATG ACGTCGCGGT GACGCTGCTG CGCGCCGACG GCACCGCGTA TCCGCTGAAG
GGCAAGCTGC TGTTCAGCGA TCTCGCGGTC GATCCGACCA CCGACACCGT CGCGATGCGC
GCGCTGTTCC CGAATCCCGA GCGCGAGCTG CTGCCGGGTG CGTATGTGCG GATCGCGCTC
GATACGGCGG TCGACCAGCG GGCGATCCTG GTGCCGCGCG ACGCGCTGCT GCGCACGGCC
GACCGCACGT CGGTGCGGGT CGTCGGCGCG AACGGCAAGG TCAAGGACGT CGAGGTCACG
GCCGACCAGA TGAGCGGCCG TGACTGGCGC ATCACGCGCG GCCTCGCGGG CGGCGAGCGC
GTGATCGTCG ACGACGCCGC GCAGTTCGCG CCCGATACGG CGGTCAAGCC CGTCGAAAAA
GCGCCGCCGT CGAAGGCGGC GCCGGTAGCG GCCGCTTCGC AGGCGGCCGC CCGTCAAACC
TGA
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| Protein sequence | MNNKRTQWRR MRLAPFALAA LLAVAGCGKG DKDAAPETAK QATVVTVRPT AVPMSVELPG
RLDAYRQAEV RARVAGIVTA RTYEEGQEVK QGAVLFRIDP APLKAARDAA QGALAKAQAA
ALAATDKRRR YDDLVRDRAV SERDHTEAVA ADTQAKAEVA SAKAELARAQ LQLDYATVTA
PIAGRARRAL VTEGALVGQD QATPLTTVEQ LDPIYVNFSQ PAADVDALRR AVKSGRATGI
AQHDVAVTLL RADGTAYPLK GKLLFSDLAV DPTTDTVAMR ALFPNPEREL LPGAYVRIAL
DTAVDQRAIL VPRDALLRTA DRTSVRVVGA NGKVKDVEVT ADQMSGRDWR ITRGLAGGER
VIVDDAAQFA PDTAVKPVEK APPSKAAPVA AASQAAARQT
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