| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1524 |
|---|
| Symbol | |
|---|
| ID | 6123202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1693335 |
|---|
| End bp | 1694207 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638105 |
|---|
| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
|---|
| Protein accession | YP_001764821 |
|---|
| Protein GI | 170732874 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.543664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGT TTCGTGTTGG CGCCTGCAGC GCCGTGCTCG GCCTGTTGGC GGCCTGCACG
TCGCCGTCGC TCGTCGAACG CGGCACCTAC TACGCCGACA CGAGCCTGCA CGCGCGCGGC
GCCGATTCGC GGATCCGCTT TCTCGTCATG CATTACACGG AAAGCGACGA GACGAAATCG
CTGCGCACGT TGACGGGCGA TTCGGTCAGC GTGCATTACG TCGTCCCGCC GCAGCCGCGC
GCCGAACGCG GGATGCCCGT CGTCTACCAG CTCGTTCCGG AAGCGCGGCG CGCGTGGCAC
GCGGGCGTCA GCGAGTGGCA GGGCACGACC GAGCTGAACG CGGTGTCGAT CGGCATCGAG
AACGTGAACC GCGGCCCGCT CGATCCGCAG CACCGCACCT GGCAGCCGTA TCCGCCCGAA
CAGGTCGACG CGCTGACCCG CCTGTCGAAG GACATCGTCG CGCGCTACGG GATTCCGCCG
ACGCGCGTGG TCGGGCACAG CGACATCGCC CCGCAACGCA AGATCGATCC CGGGCCGCTG
TTCCCGTGGC ATGCGCTCGC GCAAGCCGGC GTCGGCGCAT GGCCGGACGA TGCGACCGTC
GCCGCTCGGC TCGCCGGCCG CGACCCGCAC GCGCCGGTCG ACGTGCGCGA ATTGCAGCTC
AAGCTCGCGC GCTACGGCTA CGACGTGCCG ACCGACGGCG TGCTCGACAC GCGCACGCGG
CGCGTGTTCG CAGCGTTTCA GATGCATTTC CGGCCGTCCG ACTACGCGGG CAATCCGGAC
GCGGAAAGCG ACGCGATCGC GCAGGCGCTG CTCGACAAGT ACTTCCCCGG CACGCAAGCG
GCGGACCCCG CACCGGCGGC CGACACACCC TGA
|
|---|
| Protein sequence | MTLFRVGACS AVLGLLAACT SPSLVERGTY YADTSLHARG ADSRIRFLVM HYTESDETKS
LRTLTGDSVS VHYVVPPQPR AERGMPVVYQ LVPEARRAWH AGVSEWQGTT ELNAVSIGIE
NVNRGPLDPQ HRTWQPYPPE QVDALTRLSK DIVARYGIPP TRVVGHSDIA PQRKIDPGPL
FPWHALAQAG VGAWPDDATV AARLAGRDPH APVDVRELQL KLARYGYDVP TDGVLDTRTR
RVFAAFQMHF RPSDYAGNPD AESDAIAQAL LDKYFPGTQA ADPAPAADTP
|
|---|
| |