Gene Bcenmc03_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1450 
Symbol 
ID6123128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1604225 
End bp1604578 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID641638026 
Productendoribonuclease L-PSP 
Protein accessionYP_001764747 
Protein GI170732800 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000258277 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TTCGTCACCA CGTCGGGGCC CGTCTCTCCG AAACCGCGAT CCACAACGGT 
ACCGTGTATC TGGCCGGCCA GATCGCCGAA GACACCACGC AGGACATCCG CGGCCAGACG
CGCGAAGTGC TCGGCCACAT CGACCGCCTG CTCGCCGAAG CGAACAGCGA CAAGGCGCAT
CTGCTGTCGG TGCAGATCTA CATCTCGGAT CTCGCAAACT TCGAAGGCAT GAATGCGGAG
TGGGACGCAT GGGTCGCACC GGGCAACACG CCGCCGCGCG CCACCGTCGA GGCGAAGCTC
GCCGATCCGG CACTGCTCGT CGAGATCGTG GTCGTCGCCG CGCAGCGGAG CTGA
 
Protein sequence
MAVIRHHVGA RLSETAIHNG TVYLAGQIAE DTTQDIRGQT REVLGHIDRL LAEANSDKAH 
LLSVQIYISD LANFEGMNAE WDAWVAPGNT PPRATVEAKL ADPALLVEIV VVAAQRS