| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1446 |
|---|
| Symbol | |
|---|
| ID | 6123124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1600500 |
|---|
| End bp | 1601510 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641638022 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001764743 |
|---|
| Protein GI | 170732796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.180277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACG GTAACGACAC GCCCGCGACG CCTCTGCCGC GTCGCACCTT CCTGGCCCAG
GCCGGCGCCG GGCTCGCGGC CGGCGTCGCG CTGGCCGCAA GCACGTCCGT GCGTGCCGCC
GCCGCGACGG TGCCGGCGCC CGCGACACCG GGCGCCACGC CGTTCTGGCC GGACGGCGCG
CGGCTCGTGA TCTCGATCTC GATGCAGTTC GAGGCGGGCG GACAACCGCC CACGGGCGCG
GACAGTCCGT TTCCGGCCGT CGCGTTTCCG CCGTCGGTGC CGGTCGATCT CGCATCGGCC
ACCTGGTTTG CGTATGGCTA TCGCGAAGGC ATTCCACGCC TGCTCGACCT GTGGGACCGG
CACGGCGTGA AAGTGACGTC GCACATGATC GGGGAAGCCG CGCGCCGGCA CCCCGAACTG
GCGCGCGAGA TCGTATCGCG CGGCCACGAA GCCGCCGCGC ACGGCCCGAC GTGGCGCGCC
CAATTCGCGA TGAGCCGCGA CGACGAGCGC CGCTTCCTGA CCGAAGCGCG CGACATGGTC
GAAGCGGTGA CCGGCCAGCG TCCGACCGGC TACAACTGCA ACTGGCTGCG GCGCGGGCCG
CAGACGTTGT CGCTGCTGCA GGAACTCGGC TACACGTATC ACATCGACGA CGTCAGTCGC
GACGAACCGT TCATCGAGAC CGTCGACGGT CGCGATTTCG TGGTGGTCCC GTACACGCTG
CGCAACAACG ACATCCTGCT GATCGAAGGC CGCCACTACT CGCCGACGAT GTTCGTCGAG
CAGATCAAGC TCGATTTCGA CCAGCTGTAC GCGGAAGCCG GGCAGCGGCG CAGATTGATG
TCGATCAGTG CGCACGACCG GATCAGCGGC ACGCCGCAGA TGGTCCGCGC GTGGGACGAC
TTCCTGCACT ACGCTCGATC ACACCCCGGG GTCGCTTTCA TGCGCAAGGA CGACATTGCG
CGCTTCGCGC TGCACAGCCC ATCGACGCTG CGCGAGACCG AAACGATCTG A
|
|---|
| Protein sequence | MTHGNDTPAT PLPRRTFLAQ AGAGLAAGVA LAASTSVRAA AATVPAPATP GATPFWPDGA
RLVISISMQF EAGGQPPTGA DSPFPAVAFP PSVPVDLASA TWFAYGYREG IPRLLDLWDR
HGVKVTSHMI GEAARRHPEL AREIVSRGHE AAAHGPTWRA QFAMSRDDER RFLTEARDMV
EAVTGQRPTG YNCNWLRRGP QTLSLLQELG YTYHIDDVSR DEPFIETVDG RDFVVVPYTL
RNNDILLIEG RHYSPTMFVE QIKLDFDQLY AEAGQRRRLM SISAHDRISG TPQMVRAWDD
FLHYARSHPG VAFMRKDDIA RFALHSPSTL RETETI
|
|---|
| |